Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm43114-201ENSMUST00000198298 343 ntBASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Gm44382-201ENSMUST00000198683 122 ntBASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Gm43215-201ENSMUST00000199108 252 ntBASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Gm31211-201ENSMUST00000199170 253 ntBASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Gm45814-201ENSMUST00000212646 775 ntBASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 AC161586.1-201ENSMUST00000223232 547 ntBASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 AC154595.2-201ENSMUST00000225067 310 ntBASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Gm5229-201ENSMUST00000039375 354 ntBASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Gm36962-201ENSMUST00000192114 1761 ntBASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 AC124446.1-201ENSMUST00000221027 2644 ntBASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 AC124556.1-201ENSMUST00000218256 1319 ntBASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Mir466j-201ENSMUST00000116876 122 ntBASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Gm12230-201ENSMUST00000118301 454 ntBASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Gm15333-201ENSMUST00000118825 364 ntBASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Gm15400-201ENSMUST00000118944 601 ntBASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Gm14901-201ENSMUST00000119001 283 ntBASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Gm13013-201ENSMUST00000119087 523 ntBASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Gm14106-201ENSMUST00000119382 438 ntBASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Gm12396-201ENSMUST00000121600 306 ntBASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Gm14362-201ENSMUST00000121679 273 ntBASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Gm15254-201ENSMUST00000149567 273 ntBASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Gm22336-201ENSMUST00000157719 107 ntBASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Fth-ps2-201ENSMUST00000168364 516 ntBASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Gm24103-201ENSMUST00000174930 77 ntBASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Gm27849-201ENSMUST00000183673 125 ntBASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Gm37164-201ENSMUST00000192809 637 ntBASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Gm8929-201ENSMUST00000197781 1132 ntBASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Gm44041-201ENSMUST00000203678 396 ntBASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Gm4032-201ENSMUST00000210886 487 ntBASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Gm46223-201ENSMUST00000215196 675 ntBASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Gm20304-201ENSMUST00000218168 444 ntBASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Mir325-201ENSMUST00000083491 98 ntBASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 AC152944.1-201ENSMUST00000220160 3101 ntBASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Sh3rf1Q69ZI1 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm12633-201ENSMUST00000117742 1705 ntBASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm10241-201ENSMUST00000117664 286 ntBASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm14594-201ENSMUST00000118052 537 ntBASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm15025-201ENSMUST00000118434 418 ntBASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm14590-201ENSMUST00000118934 537 ntBASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm11862-201ENSMUST00000119678 659 ntBASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm13493-201ENSMUST00000120318 493 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms