Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm12285-201ENSMUST00000117347 233 ntBASIC5.01□□□□□ -1.61
Foxc1Q61572 Gm14628-201ENSMUST00000117508 635 ntBASIC5.01□□□□□ -1.61
Foxc1Q61572 Gm13983-201ENSMUST00000118018 865 ntBASIC5.01□□□□□ -1.61
Foxc1Q61572 Gm14753-201ENSMUST00000118503 246 ntBASIC5.01□□□□□ -1.61
Foxc1Q61572 Gm11849-201ENSMUST00000121293 261 ntBASIC5.01□□□□□ -1.61
Foxc1Q61572 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Foxc1Q61572 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC5.01□□□□□ -1.61
Foxc1Q61572 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC5.01□□□□□ -1.61
Foxc1Q61572 Gm26183-201ENSMUST00000157685 139 ntBASIC5.01□□□□□ -1.61
Foxc1Q61572 Gm26320-201ENSMUST00000157742 306 ntBASIC5.01□□□□□ -1.61
Foxc1Q61572 Gm24680-201ENSMUST00000158759 126 ntBASIC5.01□□□□□ -1.61
Foxc1Q61572 Gm16113-201ENSMUST00000159629 372 ntBASIC5.01□□□□□ -1.61
Foxc1Q61572 Gm3170-201ENSMUST00000168753 850 ntBASIC5.01□□□□□ -1.61
Foxc1Q61572 Gm20530-201ENSMUST00000174261 254 ntBASIC5.01□□□□□ -1.61
Foxc1Q61572 Gm25956-201ENSMUST00000175115 217 ntBASIC5.01□□□□□ -1.61
Foxc1Q61572 Gm3348-201ENSMUST00000177813 850 ntBASIC5.01□□□□□ -1.61
Foxc1Q61572 Gm26928-201ENSMUST00000182674 572 ntBASIC5.01□□□□□ -1.61
Foxc1Q61572 Gm29227-201ENSMUST00000187139 315 ntBASIC5.01□□□□□ -1.61
Foxc1Q61572 Gm29034-201ENSMUST00000188099 315 ntBASIC5.01□□□□□ -1.61
Foxc1Q61572 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC5.01□□□□□ -1.61
Foxc1Q61572 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC5.01□□□□□ -1.61
Foxc1Q61572 Gm37129-201ENSMUST00000195791 315 ntBASIC5.01□□□□□ -1.61
Foxc1Q61572 Gm18430-201ENSMUST00000197534 682 ntBASIC5.01□□□□□ -1.61
Foxc1Q61572 Gm43849-201ENSMUST00000201086 215 ntBASIC5.01□□□□□ -1.61
Foxc1Q61572 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Foxc1Q61572 Gm4587-201ENSMUST00000209135 637 ntBASIC5.01□□□□□ -1.61
Foxc1Q61572 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC5.01□□□□□ -1.61
Foxc1Q61572 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Foxc1Q61572 AC165092.2-201ENSMUST00000224681 368 ntBASIC5.01□□□□□ -1.61
Foxc1Q61572 CT009527.2-201ENSMUST00000225386 606 ntBASIC5.01□□□□□ -1.61
Foxc1Q61572 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Foxc1Q61572 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Foxc1Q61572 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Foxc1Q61572 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Foxc1Q61572 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Foxc1Q61572 Snora21-201ENSMUST00000082967 137 ntBASIC5.01□□□□□ -1.61
Foxc1Q61572 Mir496a-201ENSMUST00000093627 79 ntBASIC5.01□□□□□ -1.61
Foxc1Q61572 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Foxc1Q61572 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Foxc1Q61572 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Foxc1Q61572 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Foxc1Q61572 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Foxc1Q61572 AC135119.1-204ENSMUST00000228036 2663 ntBASIC5.01□□□□□ -1.61
Foxc1Q61572 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Foxc1Q61572 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Foxc1Q61572 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Foxc1Q61572 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Foxc1Q61572 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC5.01□□□□□ -1.61
Foxc1Q61572 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
Foxc1Q61572 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Foxc1Q61572 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Foxc1Q61572 Gm43496-201ENSMUST00000201682 3001 ntBASIC5.01□□□□□ -1.61
Foxc1Q61572 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Foxc1Q61572 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Foxc1Q61572 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Foxc1Q61572 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC5.01□□□□□ -1.61
Foxc1Q61572 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Foxc1Q61572 Gm10773-201ENSMUST00000218071 3935 ntBASIC5.01□□□□□ -1.61
Foxc1Q61572 AC155234.1-201ENSMUST00000225610 2823 ntBASIC5.01□□□□□ -1.61
Foxc1Q61572 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Foxc1Q61572 Gm43736-201ENSMUST00000196377 2281 ntBASIC5□□□□□ -1.61
Foxc1Q61572 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5□□□□□ -1.61
Foxc1Q61572 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Foxc1Q61572 AC126439.1-201ENSMUST00000226772 2104 ntBASIC5□□□□□ -1.61
Foxc1Q61572 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC5□□□□□ -1.61
Foxc1Q61572 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC5□□□□□ -1.61
Foxc1Q61572 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC5□□□□□ -1.61
Foxc1Q61572 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC5□□□□□ -1.61
Foxc1Q61572 Gm37249-201ENSMUST00000195185 2869 ntBASIC5□□□□□ -1.61
Foxc1Q61572 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Foxc1Q61572 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Foxc1Q61572 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Foxc1Q61572 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC5□□□□□ -1.61
Foxc1Q61572 Gm43065-201ENSMUST00000198971 2092 ntBASIC5□□□□□ -1.61
Foxc1Q61572 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC5□□□□□ -1.61
Foxc1Q61572 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Foxc1Q61572 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Foxc1Q61572 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC5□□□□□ -1.61
Foxc1Q61572 Gm22774-201ENSMUST00000102084 109 ntBASIC5□□□□□ -1.61
Foxc1Q61572 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC5□□□□□ -1.61
Foxc1Q61572 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC5□□□□□ -1.61
Foxc1Q61572 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC5□□□□□ -1.61
Foxc1Q61572 Gm26417-201ENSMUST00000104274 135 ntBASIC5□□□□□ -1.61
Foxc1Q61572 Gm26416-201ENSMUST00000104280 134 ntBASIC5□□□□□ -1.61
Foxc1Q61572 Gm14566-201ENSMUST00000118915 321 ntBASIC5□□□□□ -1.61
Foxc1Q61572 Gm6987-201ENSMUST00000119319 428 ntBASIC5□□□□□ -1.61
Foxc1Q61572 Gm12281-201ENSMUST00000119536 298 ntBASIC5□□□□□ -1.61
Foxc1Q61572 Gm14559-201ENSMUST00000121745 496 ntBASIC5□□□□□ -1.61
Foxc1Q61572 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC5□□□□□ -1.61
Foxc1Q61572 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC5□□□□□ -1.61
Foxc1Q61572 Gm25969-201ENSMUST00000157166 132 ntBASIC5□□□□□ -1.61
Foxc1Q61572 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC5□□□□□ -1.61
Foxc1Q61572 Gm7656-201ENSMUST00000182468 1004 ntBASIC5□□□□□ -1.61
Foxc1Q61572 Gm27014-201ENSMUST00000182658 937 ntBASIC5□□□□□ -1.61
Foxc1Q61572 Gm8524-201ENSMUST00000186232 379 ntBASIC5□□□□□ -1.61
Foxc1Q61572 Gm29124-201ENSMUST00000186576 452 ntBASIC5□□□□□ -1.61
Foxc1Q61572 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC5□□□□□ -1.61
Foxc1Q61572 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC5□□□□□ -1.61
Foxc1Q61572 Gm37128-201ENSMUST00000192599 232 ntBASIC5□□□□□ -1.61
Foxc1Q61572 Gm37701-201ENSMUST00000192947 1100 ntBASIC5□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms