Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gm35755-201ENSMUST00000222392 2077 ntBASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Syne3Q4FZC9 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Gm23274-201ENSMUST00000104056 130 ntBASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Gm15382-201ENSMUST00000118011 537 ntBASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Gm14794-201ENSMUST00000118181 192 ntBASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Gm7657-201ENSMUST00000118851 666 ntBASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Gm12820-201ENSMUST00000119233 342 ntBASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Gm13603-201ENSMUST00000119404 83 ntBASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Gm14125-202ENSMUST00000120921 756 ntBASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Gm5699-201ENSMUST00000152491 723 ntBASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Gm23993-201ENSMUST00000157478 144 ntBASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Gm24860-201ENSMUST00000158457 276 ntBASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Gm22261-201ENSMUST00000158691 324 ntBASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Gm26652-202ENSMUST00000181672 475 ntBASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Gm8676-201ENSMUST00000184206 637 ntBASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Mir7j-201ENSMUST00000184427 122 ntBASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Gm18181-201ENSMUST00000190670 736 ntBASIC5.38□□□□□ -1.55
Syne3Q4FZC9 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Gm28927-201ENSMUST00000191528 272 ntBASIC5.38□□□□□ -1.55
Syne3Q4FZC9 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Gm18867-201ENSMUST00000198022 1179 ntBASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Ighv1-79-201ENSMUST00000200152 350 ntBASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Gm4321-201ENSMUST00000200520 442 ntBASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Gm8774-201ENSMUST00000203621 692 ntBASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Gm19170-201ENSMUST00000212440 1084 ntBASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Gm8911-201ENSMUST00000213986 652 ntBASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC5.38□□□□□ -1.55
Syne3Q4FZC9 AC151971.3-201ENSMUST00000214694 404 ntBASIC5.38□□□□□ -1.55
Syne3Q4FZC9 AC161256.1-201ENSMUST00000217312 213 ntBASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Gm5750-201ENSMUST00000218711 801 ntBASIC5.38□□□□□ -1.55
Syne3Q4FZC9 AC152951.1-201ENSMUST00000218907 266 ntBASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Gm8681-201ENSMUST00000219115 618 ntBASIC5.38□□□□□ -1.55
Syne3Q4FZC9 AC153840.1-201ENSMUST00000219685 313 ntBASIC5.38□□□□□ -1.55
Syne3Q4FZC9 AC124569.4-201ENSMUST00000223830 1220 ntBASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Syne3Q4FZC9 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Gm43201-201ENSMUST00000195925 3416 ntBASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Gm13733-201ENSMUST00000117290 535 ntBASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Gm11943-201ENSMUST00000119473 327 ntBASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Gm15791-201ENSMUST00000120365 319 ntBASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Snrpert-201ENSMUST00000121967 279 ntBASIC5.37□□□□□ -1.55
Syne3Q4FZC9 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Gm22725-201ENSMUST00000158092 110 ntBASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Gm24498-201ENSMUST00000158445 102 ntBASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Gm27688-201ENSMUST00000183634 91 ntBASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Gm9134-201ENSMUST00000193186 551 ntBASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC5.37□□□□□ -1.55
Syne3Q4FZC9 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC5.37□□□□□ -1.55
Syne3Q4FZC9 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC5.37□□□□□ -1.55
Syne3Q4FZC9 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC5.37□□□□□ -1.55
Syne3Q4FZC9 AC165146.1-201ENSMUST00000223777 900 ntBASIC5.37□□□□□ -1.55
Syne3Q4FZC9 AC121978.1-201ENSMUST00000228357 380 ntBASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Mir421-201ENSMUST00000083575 76 ntBASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Gm3665-201ENSMUST00000177214 2461 ntBASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Syne3Q4FZC9 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms