Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
Upf3bQ3ULL6 Gm42717-201ENSMUST00000197309 3463 ntBASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 Gm44860-201ENSMUST00000208473 2346 ntBASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 Gm13478-201ENSMUST00000118312 413 ntBASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 Gm12638-201ENSMUST00000119531 298 ntBASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 Gm15267-201ENSMUST00000120888 464 ntBASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 Gm14649-201ENSMUST00000121814 324 ntBASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 Gm22637-201ENSMUST00000158144 283 ntBASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 Trbv10-201ENSMUST00000168322 289 ntBASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 Gm19807-201ENSMUST00000173971 667 ntBASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 Gm29475-201ENSMUST00000190767 312 ntBASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 Gm38270-201ENSMUST00000192721 407 ntBASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 Gm43649-201ENSMUST00000196596 391 ntBASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 Gm9245-201ENSMUST00000200528 983 ntBASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 Gm19366-201ENSMUST00000206996 156 ntBASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 Gm5338-201ENSMUST00000209530 639 ntBASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 Gm8556-201ENSMUST00000210437 664 ntBASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 Gm23928-201ENSMUST00000082469 145 ntBASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Upf3bQ3ULL6 Gm43178-201ENSMUST00000197257 1386 ntBASIC4.43□□□□□ -1.7
Upf3bQ3ULL6 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Upf3bQ3ULL6 Gm37393-201ENSMUST00000195118 3870 ntBASIC4.43□□□□□ -1.7
Upf3bQ3ULL6 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Upf3bQ3ULL6 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Upf3bQ3ULL6 Gm6754-201ENSMUST00000117124 913 ntBASIC4.43□□□□□ -1.7
Upf3bQ3ULL6 Gm11325-201ENSMUST00000119967 469 ntBASIC4.43□□□□□ -1.7
Upf3bQ3ULL6 Gm4912-201ENSMUST00000122212 1044 ntBASIC4.43□□□□□ -1.7
Upf3bQ3ULL6 Gm25965-201ENSMUST00000157170 93 ntBASIC4.43□□□□□ -1.7
Upf3bQ3ULL6 Gm25669-201ENSMUST00000157699 112 ntBASIC4.43□□□□□ -1.7
Upf3bQ3ULL6 Gm24690-201ENSMUST00000157759 97 ntBASIC4.43□□□□□ -1.7
Upf3bQ3ULL6 Gm26036-201ENSMUST00000158149 144 ntBASIC4.43□□□□□ -1.7
Upf3bQ3ULL6 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Upf3bQ3ULL6 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Upf3bQ3ULL6 Gm19503-201ENSMUST00000187109 241 ntBASIC4.43□□□□□ -1.7
Upf3bQ3ULL6 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC4.43□□□□□ -1.7
Upf3bQ3ULL6 Gm36638-201ENSMUST00000193295 400 ntBASIC4.43□□□□□ -1.7
Upf3bQ3ULL6 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.43□□□□□ -1.7
Upf3bQ3ULL6 Gm17780-201ENSMUST00000207142 612 ntBASIC4.43□□□□□ -1.7
Upf3bQ3ULL6 Gm45269-201ENSMUST00000210359 282 ntBASIC4.43□□□□□ -1.7
Upf3bQ3ULL6 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Upf3bQ3ULL6 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Upf3bQ3ULL6 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Upf3bQ3ULL6 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
Upf3bQ3ULL6 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Upf3bQ3ULL6 AC123705.2-201ENSMUST00000221653 2009 ntBASIC4.43□□□□□ -1.7
Upf3bQ3ULL6 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Upf3bQ3ULL6 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 Gm8666-201ENSMUST00000117517 292 ntBASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 Gm25177-201ENSMUST00000122634 117 ntBASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 Gm25456-201ENSMUST00000157952 109 ntBASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 Gm25605-201ENSMUST00000158364 124 ntBASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 Gm28615-201ENSMUST00000187527 482 ntBASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 Gm28974-201ENSMUST00000187893 231 ntBASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 Gm37569-201ENSMUST00000192111 1722 ntBASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 Gm18377-201ENSMUST00000215141 607 ntBASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 AC154738.5-201ENSMUST00000227397 310 ntBASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 Gm43065-201ENSMUST00000198971 2092 ntBASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 Gm42455-201ENSMUST00000199761 2736 ntBASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 AC159188.2-201ENSMUST00000224103 1301 ntBASIC4.42□□□□□ -1.7
Upf3bQ3ULL6 Gm5248-201ENSMUST00000186108 4046 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 137.9 ms