Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 Gm5248-201ENSMUST00000186108 4046 ntBASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 Gm8674-201ENSMUST00000179367 3047 ntBASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 Gm12067-201ENSMUST00000119755 1148 ntBASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 Gm28267-201ENSMUST00000191093 265 ntBASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 Gm17953-201ENSMUST00000192061 667 ntBASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 Gm37501-201ENSMUST00000192830 691 ntBASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 Gm42566-201ENSMUST00000197120 643 ntBASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 Gm43405-201ENSMUST00000198642 337 ntBASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 Gm5995-201ENSMUST00000204107 1273 ntBASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 Gm45539-201ENSMUST00000210313 428 ntBASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 AC124562.1-201ENSMUST00000224673 337 ntBASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 Gm37639-201ENSMUST00000191623 2785 ntBASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Upf3aQ3ULJ3 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Upf3aQ3ULJ3 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Upf3aQ3ULJ3 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Upf3aQ3ULJ3 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Upf3aQ3ULJ3 Gm5155-201ENSMUST00000072381 2841 ntBASIC4.47□□□□□ -1.69
Upf3aQ3ULJ3 Gm2033-201ENSMUST00000210753 2287 ntBASIC4.47□□□□□ -1.69
Upf3aQ3ULJ3 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Upf3aQ3ULJ3 Gm6461-201ENSMUST00000120015 633 ntBASIC4.47□□□□□ -1.69
Upf3aQ3ULJ3 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC4.47□□□□□ -1.69
Upf3aQ3ULJ3 Gm4487-201ENSMUST00000150617 442 ntBASIC4.47□□□□□ -1.69
Upf3aQ3ULJ3 Gm22314-201ENSMUST00000158007 281 ntBASIC4.47□□□□□ -1.69
Upf3aQ3ULJ3 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Upf3aQ3ULJ3 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC4.47□□□□□ -1.69
Upf3aQ3ULJ3 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.47□□□□□ -1.69
Upf3aQ3ULJ3 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.47□□□□□ -1.69
Upf3aQ3ULJ3 Gm42990-201ENSMUST00000199231 312 ntBASIC4.47□□□□□ -1.69
Upf3aQ3ULJ3 Gm8820-201ENSMUST00000204077 571 ntBASIC4.47□□□□□ -1.69
Upf3aQ3ULJ3 AC168059.1-201ENSMUST00000225846 841 ntBASIC4.47□□□□□ -1.69
Upf3aQ3ULJ3 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.47□□□□□ -1.69
Upf3aQ3ULJ3 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Upf3aQ3ULJ3 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
Upf3aQ3ULJ3 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Upf3aQ3ULJ3 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Upf3aQ3ULJ3 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC4.47□□□□□ -1.69
Upf3aQ3ULJ3 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Upf3aQ3ULJ3 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Upf3aQ3ULJ3 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Upf3aQ3ULJ3 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Upf3aQ3ULJ3 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.47□□□□□ -1.69
Upf3aQ3ULJ3 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Upf3aQ3ULJ3 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
Upf3aQ3ULJ3 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
Upf3aQ3ULJ3 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Upf3aQ3ULJ3 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Upf3aQ3ULJ3 AC123705.2-201ENSMUST00000221653 2009 ntBASIC4.46□□□□□ -1.69
Upf3aQ3ULJ3 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Upf3aQ3ULJ3 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Upf3aQ3ULJ3 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Upf3aQ3ULJ3 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Upf3aQ3ULJ3 Mir105-201ENSMUST00000104655 80 ntBASIC4.46□□□□□ -1.7
Upf3aQ3ULJ3 Gm23226-201ENSMUST00000116927 103 ntBASIC4.46□□□□□ -1.7
Upf3aQ3ULJ3 Gm11406-201ENSMUST00000117418 484 ntBASIC4.46□□□□□ -1.7
Upf3aQ3ULJ3 Gm12571-201ENSMUST00000118132 243 ntBASIC4.46□□□□□ -1.7
Upf3aQ3ULJ3 Gm13785-201ENSMUST00000119099 690 ntBASIC4.46□□□□□ -1.7
Upf3aQ3ULJ3 Gm23098-201ENSMUST00000157552 299 ntBASIC4.46□□□□□ -1.7
Upf3aQ3ULJ3 Gm23499-201ENSMUST00000157736 268 ntBASIC4.46□□□□□ -1.7
Upf3aQ3ULJ3 Gm23782-201ENSMUST00000157939 120 ntBASIC4.46□□□□□ -1.7
Upf3aQ3ULJ3 Gm4248-201ENSMUST00000196905 316 ntBASIC4.46□□□□□ -1.7
Upf3aQ3ULJ3 Gm43856-201ENSMUST00000197004 369 ntBASIC4.46□□□□□ -1.7
Upf3aQ3ULJ3 Gm35702-201ENSMUST00000198653 511 ntBASIC4.46□□□□□ -1.7
Upf3aQ3ULJ3 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC4.46□□□□□ -1.7
Upf3aQ3ULJ3 Gm44583-201ENSMUST00000207478 281 ntBASIC4.46□□□□□ -1.7
Upf3aQ3ULJ3 Gm29774-201ENSMUST00000219270 436 ntBASIC4.46□□□□□ -1.7
Upf3aQ3ULJ3 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.46□□□□□ -1.7
Upf3aQ3ULJ3 AC154838.1-201ENSMUST00000228944 911 ntBASIC4.46□□□□□ -1.7
Upf3aQ3ULJ3 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Upf3aQ3ULJ3 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC4.46□□□□□ -1.7
Upf3aQ3ULJ3 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Upf3aQ3ULJ3 Gm24919-201ENSMUST00000083020 106 ntBASIC4.46□□□□□ -1.7
Upf3aQ3ULJ3 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Upf3aQ3ULJ3 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms