Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Mir6960-201ENSMUST00000183449 61 ntBASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Mir6391-201ENSMUST00000184391 104 ntBASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Gm29196-201ENSMUST00000189239 618 ntBASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Gm8823-201ENSMUST00000193158 433 ntBASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Gm37088-201ENSMUST00000193887 406 ntBASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Gm21112-201ENSMUST00000212224 578 ntBASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Gm7760-201ENSMUST00000212265 578 ntBASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Gm7807-201ENSMUST00000212475 578 ntBASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Snord22-201ENSMUST00000083153 126 ntBASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 n-R5s85-201ENSMUST00000083453 113 ntBASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Mir346-201ENSMUST00000083547 98 ntBASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Gm44847-201ENSMUST00000207104 1991 ntBASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Gm35755-201ENSMUST00000222392 2077 ntBASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Trafd1Q3UDK1 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 Gm43216-201ENSMUST00000196295 1333 ntBASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 Gm4596-201ENSMUST00000117197 442 ntBASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 Gm11878-201ENSMUST00000117908 400 ntBASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 Gm12564-201ENSMUST00000119860 321 ntBASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 Gm15061-201ENSMUST00000121076 1046 ntBASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 Gm3084-201ENSMUST00000169967 598 ntBASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 Gm28871-201ENSMUST00000186191 687 ntBASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 Gm19503-201ENSMUST00000187109 241 ntBASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 Gm5368-201ENSMUST00000189012 589 ntBASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 Gm43710-201ENSMUST00000199583 452 ntBASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 AC134864.1-201ENSMUST00000226326 511 ntBASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 Gm24207-201ENSMUST00000082781 108 ntBASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trafd1Q3UDK1 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 Gm45131-201ENSMUST00000208051 2582 ntBASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 Mir761-201ENSMUST00000103245 76 ntBASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 Gm13478-201ENSMUST00000118312 413 ntBASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 Klra14-ps-201ENSMUST00000119532 802 ntBASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 Gm28118-201ENSMUST00000185957 294 ntBASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 Gm36638-201ENSMUST00000193295 400 ntBASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 Gm17951-201ENSMUST00000198536 496 ntBASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 AC123944.2-201ENSMUST00000215290 382 ntBASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 Gm23623-201ENSMUST00000082461 107 ntBASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 AC154184.1-201ENSMUST00000224375 1620 ntBASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 Gm37124-201ENSMUST00000192140 1992 ntBASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 130.8 ms