Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Trim63Q38HM4 Gm17976-201ENSMUST00000184037 1909 ntBASIC4.4□□□□□ -1.71
Trim63Q38HM4 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Trim63Q38HM4 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Trim63Q38HM4 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC4.4□□□□□ -1.71
Trim63Q38HM4 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC4.4□□□□□ -1.71
Trim63Q38HM4 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.4□□□□□ -1.71
Trim63Q38HM4 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
Trim63Q38HM4 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
Trim63Q38HM4 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
Trim63Q38HM4 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Trim63Q38HM4 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Trim63Q38HM4 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Trim63Q38HM4 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Trim63Q38HM4 Mir674-201ENSMUST00000102421 100 ntBASIC4.39□□□□□ -1.71
Trim63Q38HM4 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Trim63Q38HM4 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Trim63Q38HM4 Gm16082-201ENSMUST00000115992 377 ntBASIC4.39□□□□□ -1.71
Trim63Q38HM4 Gm4596-201ENSMUST00000117197 442 ntBASIC4.39□□□□□ -1.71
Trim63Q38HM4 Gm14566-201ENSMUST00000118915 321 ntBASIC4.39□□□□□ -1.71
Trim63Q38HM4 Gm2318-201ENSMUST00000119623 639 ntBASIC4.39□□□□□ -1.71
Trim63Q38HM4 Gm2768-201ENSMUST00000121062 250 ntBASIC4.39□□□□□ -1.71
Trim63Q38HM4 Gm24517-201ENSMUST00000122560 107 ntBASIC4.39□□□□□ -1.71
Trim63Q38HM4 Gm25179-201ENSMUST00000122632 128 ntBASIC4.39□□□□□ -1.71
Trim63Q38HM4 Gm16330-201ENSMUST00000128324 297 ntBASIC4.39□□□□□ -1.71
Trim63Q38HM4 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
Trim63Q38HM4 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC4.39□□□□□ -1.71
Trim63Q38HM4 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC4.39□□□□□ -1.71
Trim63Q38HM4 Gm7438-201ENSMUST00000177664 639 ntBASIC4.39□□□□□ -1.71
Trim63Q38HM4 Gm7408-201ENSMUST00000178014 639 ntBASIC4.39□□□□□ -1.71
Trim63Q38HM4 Gm7386-201ENSMUST00000178020 639 ntBASIC4.39□□□□□ -1.71
Trim63Q38HM4 Gm3657-201ENSMUST00000178170 639 ntBASIC4.39□□□□□ -1.71
Trim63Q38HM4 Gm7415-201ENSMUST00000178205 639 ntBASIC4.39□□□□□ -1.71
Trim63Q38HM4 Gm7398-201ENSMUST00000178589 639 ntBASIC4.39□□□□□ -1.71
Trim63Q38HM4 Gm7391-201ENSMUST00000178680 639 ntBASIC4.39□□□□□ -1.71
Trim63Q38HM4 Gm7375-201ENSMUST00000179232 639 ntBASIC4.39□□□□□ -1.71
Trim63Q38HM4 Gm3681-201ENSMUST00000179940 639 ntBASIC4.39□□□□□ -1.71
Trim63Q38HM4 Mir6344-201ENSMUST00000183462 104 ntBASIC4.39□□□□□ -1.71
Trim63Q38HM4 Gm27295-201ENSMUST00000184264 153 ntBASIC4.39□□□□□ -1.71
Trim63Q38HM4 Gm27817-201ENSMUST00000184302 233 ntBASIC4.39□□□□□ -1.71
Trim63Q38HM4 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Trim63Q38HM4 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Trim63Q38HM4 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Trim63Q38HM4 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC4.39□□□□□ -1.71
Trim63Q38HM4 Gm38329-201ENSMUST00000193473 427 ntBASIC4.39□□□□□ -1.71
Trim63Q38HM4 Gm36259-201ENSMUST00000197340 392 ntBASIC4.39□□□□□ -1.71
Trim63Q38HM4 Gm44361-201ENSMUST00000197960 94 ntBASIC4.39□□□□□ -1.71
Trim63Q38HM4 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC4.39□□□□□ -1.71
Trim63Q38HM4 Gm42886-201ENSMUST00000199214 466 ntBASIC4.39□□□□□ -1.71
Trim63Q38HM4 Gm44147-201ENSMUST00000204658 94 ntBASIC4.39□□□□□ -1.71
Trim63Q38HM4 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC4.39□□□□□ -1.71
Trim63Q38HM4 Gm19092-201ENSMUST00000209036 969 ntBASIC4.39□□□□□ -1.71
Trim63Q38HM4 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Trim63Q38HM4 AC160016.1-201ENSMUST00000215589 448 ntBASIC4.39□□□□□ -1.71
Trim63Q38HM4 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC4.39□□□□□ -1.71
Trim63Q38HM4 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Trim63Q38HM4 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC4.39□□□□□ -1.71
Trim63Q38HM4 CT030260.1-201ENSMUST00000223243 442 ntBASIC4.39□□□□□ -1.71
Trim63Q38HM4 AC154840.1-201ENSMUST00000225216 408 ntBASIC4.39□□□□□ -1.71
Trim63Q38HM4 AC154738.2-201ENSMUST00000227403 1110 ntBASIC4.39□□□□□ -1.71
Trim63Q38HM4 AC122858.1-202ENSMUST00000228290 986 ntBASIC4.39□□□□□ -1.71
Trim63Q38HM4 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Trim63Q38HM4 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Trim63Q38HM4 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Trim63Q38HM4 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Trim63Q38HM4 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Trim63Q38HM4 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
Trim63Q38HM4 Gm42614-201ENSMUST00000198724 1554 ntBASIC4.39□□□□□ -1.71
Trim63Q38HM4 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Trim63Q38HM4 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Trim63Q38HM4 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.39□□□□□ -1.71
Trim63Q38HM4 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Trim63Q38HM4 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trim63Q38HM4 Gm7195-201ENSMUST00000190869 1707 ntBASIC4.38□□□□□ -1.71
Trim63Q38HM4 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC4.38□□□□□ -1.71
Trim63Q38HM4 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Trim63Q38HM4 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
Trim63Q38HM4 Gm22781-201ENSMUST00000104083 137 ntBASIC4.38□□□□□ -1.71
Trim63Q38HM4 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC4.38□□□□□ -1.71
Trim63Q38HM4 Gm13744-201ENSMUST00000118953 850 ntBASIC4.38□□□□□ -1.71
Trim63Q38HM4 Gm8648-201ENSMUST00000122457 221 ntBASIC4.38□□□□□ -1.71
Trim63Q38HM4 Gm9428-201ENSMUST00000127214 769 ntBASIC4.38□□□□□ -1.71
Trim63Q38HM4 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC4.38□□□□□ -1.71
Trim63Q38HM4 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC4.38□□□□□ -1.71
Trim63Q38HM4 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC4.38□□□□□ -1.71
Trim63Q38HM4 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trim63Q38HM4 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC4.38□□□□□ -1.71
Trim63Q38HM4 Gm23233-201ENSMUST00000157301 137 ntBASIC4.38□□□□□ -1.71
Trim63Q38HM4 Gm22596-201ENSMUST00000157601 316 ntBASIC4.38□□□□□ -1.71
Trim63Q38HM4 Gm25180-201ENSMUST00000157746 115 ntBASIC4.38□□□□□ -1.71
Trim63Q38HM4 Gm25989-201ENSMUST00000158761 133 ntBASIC4.38□□□□□ -1.71
Trim63Q38HM4 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Trim63Q38HM4 Gm16353-201ENSMUST00000159458 1223 ntBASIC4.38□□□□□ -1.71
Trim63Q38HM4 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC4.38□□□□□ -1.71
Trim63Q38HM4 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC4.38□□□□□ -1.71
Trim63Q38HM4 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC4.38□□□□□ -1.71
Trim63Q38HM4 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC4.38□□□□□ -1.71
Trim63Q38HM4 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Trim63Q38HM4 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Trim63Q38HM4 Gm3454-201ENSMUST00000185571 412 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms