Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC6.19□□□□□ -1.42
Col6a1Q04857 Gm37523-201ENSMUST00000194901 412 ntBASIC6.19□□□□□ -1.42
Col6a1Q04857 Gm42805-201ENSMUST00000196158 276 ntBASIC6.19□□□□□ -1.42
Col6a1Q04857 Api5-ps-201ENSMUST00000206607 577 ntBASIC6.19□□□□□ -1.42
Col6a1Q04857 Gm45312-201ENSMUST00000210566 311 ntBASIC6.19□□□□□ -1.42
Col6a1Q04857 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC6.19□□□□□ -1.42
Col6a1Q04857 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a1Q04857 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC6.19□□□□□ -1.42
Col6a1Q04857 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC6.19□□□□□ -1.42
Col6a1Q04857 AC238676.3-201ENSMUST00000223042 154 ntBASIC6.19□□□□□ -1.42
Col6a1Q04857 AC160999.1-201ENSMUST00000225675 810 ntBASIC6.19□□□□□ -1.42
Col6a1Q04857 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Col6a1Q04857 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC6.19□□□□□ -1.42
Col6a1Q04857 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Col6a1Q04857 Gm22810-201ENSMUST00000082741 158 ntBASIC6.19□□□□□ -1.42
Col6a1Q04857 Gm24029-201ENSMUST00000083928 143 ntBASIC6.19□□□□□ -1.42
Col6a1Q04857 Gm10356-201ENSMUST00000097152 1258 ntBASIC6.19□□□□□ -1.42
Col6a1Q04857 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Col6a1Q04857 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Col6a1Q04857 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a1Q04857 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Col6a1Q04857 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC6.19□□□□□ -1.42
Col6a1Q04857 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a1Q04857 Gm42492-201ENSMUST00000195780 2915 ntBASIC6.19□□□□□ -1.42
Col6a1Q04857 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
Col6a1Q04857 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a1Q04857 AC124516.3-201ENSMUST00000221302 3613 ntBASIC6.18□□□□□ -1.42
Col6a1Q04857 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Col6a1Q04857 Gm2987-201ENSMUST00000187673 1693 ntBASIC6.18□□□□□ -1.42
Col6a1Q04857 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a1Q04857 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Col6a1Q04857 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Col6a1Q04857 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Col6a1Q04857 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a1Q04857 Gm26146-201ENSMUST00000104478 185 ntBASIC6.18□□□□□ -1.42
Col6a1Q04857 Gm3940-201ENSMUST00000105087 432 ntBASIC6.18□□□□□ -1.42
Col6a1Q04857 Gm14670-201ENSMUST00000117327 337 ntBASIC6.18□□□□□ -1.42
Col6a1Q04857 Gm13379-201ENSMUST00000118053 621 ntBASIC6.18□□□□□ -1.42
Col6a1Q04857 Gm13785-201ENSMUST00000119099 690 ntBASIC6.18□□□□□ -1.42
Col6a1Q04857 Gm14472-201ENSMUST00000119815 282 ntBASIC6.18□□□□□ -1.42
Col6a1Q04857 Gm13482-201ENSMUST00000119842 254 ntBASIC6.18□□□□□ -1.42
Col6a1Q04857 Gm14991-201ENSMUST00000119913 598 ntBASIC6.18□□□□□ -1.42
Col6a1Q04857 Gm11825-201ENSMUST00000120710 736 ntBASIC6.18□□□□□ -1.42
Col6a1Q04857 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC6.18□□□□□ -1.42
Col6a1Q04857 Gm12732-201ENSMUST00000121688 180 ntBASIC6.18□□□□□ -1.42
Col6a1Q04857 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC6.18□□□□□ -1.42
Col6a1Q04857 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC6.18□□□□□ -1.42
Col6a1Q04857 Gm9457-201ENSMUST00000180176 372 ntBASIC6.18□□□□□ -1.42
Col6a1Q04857 Mir6975-201ENSMUST00000184879 61 ntBASIC6.18□□□□□ -1.42
Col6a1Q04857 Mir496b-201ENSMUST00000184935 113 ntBASIC6.18□□□□□ -1.42
Col6a1Q04857 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC6.18□□□□□ -1.42
Col6a1Q04857 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a1Q04857 Gm28474-201ENSMUST00000188501 315 ntBASIC6.18□□□□□ -1.42
Col6a1Q04857 Gm37111-201ENSMUST00000193250 634 ntBASIC6.18□□□□□ -1.42
Col6a1Q04857 Igkv2-107-201ENSMUST00000196000 313 ntBASIC6.18□□□□□ -1.42
Col6a1Q04857 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a1Q04857 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a1Q04857 Gm18791-201ENSMUST00000204611 726 ntBASIC6.18□□□□□ -1.42
Col6a1Q04857 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC6.18□□□□□ -1.42
Col6a1Q04857 Gm5917-201ENSMUST00000217638 721 ntBASIC6.18□□□□□ -1.42
Col6a1Q04857 Gm8681-201ENSMUST00000219115 618 ntBASIC6.18□□□□□ -1.42
Col6a1Q04857 AC155929.1-201ENSMUST00000220217 1276 ntBASIC6.18□□□□□ -1.42
Col6a1Q04857 AC122465.3-201ENSMUST00000221644 355 ntBASIC6.18□□□□□ -1.42
Col6a1Q04857 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a1Q04857 Gm9845-201ENSMUST00000056409 598 ntBASIC6.18□□□□□ -1.42
Col6a1Q04857 Gm22807-201ENSMUST00000082737 129 ntBASIC6.18□□□□□ -1.42
Col6a1Q04857 Gm26176-201ENSMUST00000083795 105 ntBASIC6.18□□□□□ -1.42
Col6a1Q04857 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a1Q04857 Gm45149-201ENSMUST00000206459 2172 ntBASIC6.18□□□□□ -1.42
Col6a1Q04857 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC6.18□□□□□ -1.42
Col6a1Q04857 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC6.18□□□□□ -1.42
Col6a1Q04857 Gm18954-201ENSMUST00000222200 1792 ntBASIC6.18□□□□□ -1.42
Col6a1Q04857 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a1Q04857 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Col6a1Q04857 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a1Q04857 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a1Q04857 Gm45577-201ENSMUST00000210206 2287 ntBASIC6.18□□□□□ -1.42
Col6a1Q04857 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a1Q04857 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Col6a1Q04857 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC6.18□□□□□ -1.42
Col6a1Q04857 Gm16270-201ENSMUST00000160327 3238 ntBASIC6.18□□□□□ -1.42
Col6a1Q04857 Gm5594-201ENSMUST00000172712 1429 ntBASIC6.17□□□□□ -1.42
Col6a1Q04857 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC6.17□□□□□ -1.42
Col6a1Q04857 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a1Q04857 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a1Q04857 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
Col6a1Q04857 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
Col6a1Q04857 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
Col6a1Q04857 Gm22488-201ENSMUST00000116811 127 ntBASIC6.17□□□□□ -1.42
Col6a1Q04857 Gm16128-201ENSMUST00000117855 626 ntBASIC6.17□□□□□ -1.42
Col6a1Q04857 Gm6031-201ENSMUST00000121314 1054 ntBASIC6.17□□□□□ -1.42
Col6a1Q04857 Llph-ps2-201ENSMUST00000122000 393 ntBASIC6.17□□□□□ -1.42
Col6a1Q04857 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Col6a1Q04857 Gm25185-201ENSMUST00000157754 96 ntBASIC6.17□□□□□ -1.42
Col6a1Q04857 Gm22726-201ENSMUST00000158089 179 ntBASIC6.17□□□□□ -1.42
Col6a1Q04857 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Col6a1Q04857 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC6.17□□□□□ -1.42
Col6a1Q04857 Gm4845-201ENSMUST00000179202 562 ntBASIC6.17□□□□□ -1.42
Col6a1Q04857 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC6.17□□□□□ -1.42
Col6a1Q04857 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 94.5 ms