Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Scn1bP97952 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Scn1bP97952 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Scn1bP97952 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Scn1bP97952 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Scn1bP97952 Gm25682-201ENSMUST00000083942 164 ntBASIC4.27□□□□□ -1.73
Scn1bP97952 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Scn1bP97952 Gm42537-201ENSMUST00000198260 2574 ntBASIC4.27□□□□□ -1.73
Scn1bP97952 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC4.27□□□□□ -1.73
Scn1bP97952 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Scn1bP97952 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.27□□□□□ -1.73
Scn1bP97952 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.27□□□□□ -1.73
Scn1bP97952 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Scn1bP97952 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Scn1bP97952 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Scn1bP97952 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.26□□□□□ -1.73
Scn1bP97952 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Scn1bP97952 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Scn1bP97952 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
Scn1bP97952 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Scn1bP97952 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Scn1bP97952 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Scn1bP97952 Gm5925-201ENSMUST00000105016 1497 ntBASIC4.26□□□□□ -1.73
Scn1bP97952 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Scn1bP97952 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Scn1bP97952 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.26□□□□□ -1.73
Scn1bP97952 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.26□□□□□ -1.73
Scn1bP97952 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
Scn1bP97952 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC4.26□□□□□ -1.73
Scn1bP97952 Gm12564-201ENSMUST00000119860 321 ntBASIC4.26□□□□□ -1.73
Scn1bP97952 Gm15193-201ENSMUST00000120224 865 ntBASIC4.26□□□□□ -1.73
Scn1bP97952 Mup-ps13-201ENSMUST00000120662 545 ntBASIC4.26□□□□□ -1.73
Scn1bP97952 Mup-ps1-201ENSMUST00000120720 544 ntBASIC4.26□□□□□ -1.73
Scn1bP97952 Gm13000-201ENSMUST00000120937 496 ntBASIC4.26□□□□□ -1.73
Scn1bP97952 Gm14577-201ENSMUST00000121134 256 ntBASIC4.26□□□□□ -1.73
Scn1bP97952 Gm12978-201ENSMUST00000121250 522 ntBASIC4.26□□□□□ -1.73
Scn1bP97952 Gm14162-201ENSMUST00000121985 601 ntBASIC4.26□□□□□ -1.73
Scn1bP97952 Gm22208-201ENSMUST00000122658 110 ntBASIC4.26□□□□□ -1.73
Scn1bP97952 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC4.26□□□□□ -1.73
Scn1bP97952 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Scn1bP97952 Gm25037-201ENSMUST00000175418 110 ntBASIC4.26□□□□□ -1.73
Scn1bP97952 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC4.26□□□□□ -1.73
Scn1bP97952 Gm28830-201ENSMUST00000188192 213 ntBASIC4.26□□□□□ -1.73
Scn1bP97952 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Scn1bP97952 Gm37243-201ENSMUST00000193407 595 ntBASIC4.26□□□□□ -1.73
Scn1bP97952 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Scn1bP97952 Gm42926-201ENSMUST00000200496 697 ntBASIC4.26□□□□□ -1.73
Scn1bP97952 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Scn1bP97952 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Scn1bP97952 Gm44954-201ENSMUST00000208513 227 ntBASIC4.26□□□□□ -1.73
Scn1bP97952 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC4.26□□□□□ -1.73
Scn1bP97952 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC4.26□□□□□ -1.73
Scn1bP97952 Gm45409-201ENSMUST00000211486 252 ntBASIC4.26□□□□□ -1.73
Scn1bP97952 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC4.26□□□□□ -1.73
Scn1bP97952 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC4.26□□□□□ -1.73
Scn1bP97952 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC4.26□□□□□ -1.73
Scn1bP97952 AL807824.1-201ENSMUST00000223151 183 ntBASIC4.26□□□□□ -1.73
Scn1bP97952 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Scn1bP97952 AC138765.1-201ENSMUST00000228657 385 ntBASIC4.26□□□□□ -1.73
Scn1bP97952 CT009600.1-201ENSMUST00000228771 337 ntBASIC4.26□□□□□ -1.73
Scn1bP97952 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Scn1bP97952 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Scn1bP97952 Mir133b-201ENSMUST00000083546 119 ntBASIC4.26□□□□□ -1.73
Scn1bP97952 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Scn1bP97952 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
Scn1bP97952 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Scn1bP97952 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Scn1bP97952 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Scn1bP97952 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Scn1bP97952 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Scn1bP97952 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.26□□□□□ -1.73
Scn1bP97952 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Scn1bP97952 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.26□□□□□ -1.73
Scn1bP97952 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.26□□□□□ -1.73
Scn1bP97952 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.25□□□□□ -1.73
Scn1bP97952 Gm44567-201ENSMUST00000205645 2631 ntBASIC4.25□□□□□ -1.73
Scn1bP97952 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.25□□□□□ -1.73
Scn1bP97952 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Scn1bP97952 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC4.25□□□□□ -1.73
Scn1bP97952 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Scn1bP97952 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC4.25□□□□□ -1.73
Scn1bP97952 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Scn1bP97952 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC4.25□□□□□ -1.73
Scn1bP97952 Gm7754-201ENSMUST00000223075 2064 ntBASIC4.25□□□□□ -1.73
Scn1bP97952 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC4.25□□□□□ -1.73
Scn1bP97952 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
Scn1bP97952 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Scn1bP97952 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
Scn1bP97952 Gm6429-201ENSMUST00000117144 475 ntBASIC4.25□□□□□ -1.73
Scn1bP97952 Gm7834-201ENSMUST00000117560 437 ntBASIC4.25□□□□□ -1.73
Scn1bP97952 Gm13386-201ENSMUST00000117677 124 ntBASIC4.25□□□□□ -1.73
Scn1bP97952 Defa-ps1-201ENSMUST00000119062 282 ntBASIC4.25□□□□□ -1.73
Scn1bP97952 Gm9078-201ENSMUST00000119126 617 ntBASIC4.25□□□□□ -1.73
Scn1bP97952 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Scn1bP97952 Gm14534-201ENSMUST00000120045 357 ntBASIC4.25□□□□□ -1.73
Scn1bP97952 Gm13452-201ENSMUST00000120896 1097 ntBASIC4.25□□□□□ -1.73
Scn1bP97952 Gm13132-201ENSMUST00000121194 472 ntBASIC4.25□□□□□ -1.73
Scn1bP97952 Gm12372-201ENSMUST00000121654 768 ntBASIC4.25□□□□□ -1.73
Scn1bP97952 Defa-ps6-201ENSMUST00000122172 282 ntBASIC4.25□□□□□ -1.73
Scn1bP97952 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms