Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Nkx3-1P97436 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Nkx3-1P97436 Gm42946-201ENSMUST00000196108 2570 ntBASIC3.66□□□□□ -1.82
Nkx3-1P97436 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Nkx3-1P97436 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Nkx3-1P97436 Gm45517-201ENSMUST00000209973 2468 ntBASIC3.66□□□□□ -1.82
Nkx3-1P97436 Gm43329-201ENSMUST00000200120 3232 ntBASIC3.66□□□□□ -1.82
Nkx3-1P97436 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Nkx3-1P97436 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
Nkx3-1P97436 Gm7754-201ENSMUST00000223075 2064 ntBASIC3.66□□□□□ -1.82
Nkx3-1P97436 Gm18422-202ENSMUST00000203798 2214 ntBASIC3.66□□□□□ -1.82
Nkx3-1P97436 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Nkx3-1P97436 Gm10484-201ENSMUST00000196372 4759 ntBASIC3.66□□□□□ -1.82
Nkx3-1P97436 AC159476.1-201ENSMUST00000215914 1668 ntBASIC3.65□□□□□ -1.82
Nkx3-1P97436 AC120375.2-201ENSMUST00000226532 1853 ntBASIC3.65□□□□□ -1.82
Nkx3-1P97436 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC3.65□□□□□ -1.82
Nkx3-1P97436 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Nkx3-1P97436 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC3.65□□□□□ -1.83
Nkx3-1P97436 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC3.65□□□□□ -1.83
Nkx3-1P97436 Gm11874-201ENSMUST00000117437 130 ntBASIC3.65□□□□□ -1.83
Nkx3-1P97436 Gm12311-201ENSMUST00000118803 374 ntBASIC3.65□□□□□ -1.83
Nkx3-1P97436 Gm12849-201ENSMUST00000120013 739 ntBASIC3.65□□□□□ -1.83
Nkx3-1P97436 Gm11398-201ENSMUST00000120330 320 ntBASIC3.65□□□□□ -1.83
Nkx3-1P97436 Gm1866-201ENSMUST00000120701 477 ntBASIC3.65□□□□□ -1.83
Nkx3-1P97436 Gm11931-201ENSMUST00000121630 447 ntBASIC3.65□□□□□ -1.83
Nkx3-1P97436 Gm12755-201ENSMUST00000122297 282 ntBASIC3.65□□□□□ -1.83
Nkx3-1P97436 Gm23960-201ENSMUST00000157206 131 ntBASIC3.65□□□□□ -1.83
Nkx3-1P97436 Gm22501-201ENSMUST00000158981 127 ntBASIC3.65□□□□□ -1.83
Nkx3-1P97436 Gm16318-201ENSMUST00000162402 601 ntBASIC3.65□□□□□ -1.83
Nkx3-1P97436 Gm17109-201ENSMUST00000163985 358 ntBASIC3.65□□□□□ -1.83
Nkx3-1P97436 Mir6345-201ENSMUST00000184286 128 ntBASIC3.65□□□□□ -1.83
Nkx3-1P97436 Gm28974-201ENSMUST00000187893 231 ntBASIC3.65□□□□□ -1.83
Nkx3-1P97436 Gm20561-201ENSMUST00000188131 292 ntBASIC3.65□□□□□ -1.83
Nkx3-1P97436 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC3.65□□□□□ -1.83
Nkx3-1P97436 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC3.65□□□□□ -1.83
Nkx3-1P97436 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC3.65□□□□□ -1.83
Nkx3-1P97436 Gm43855-201ENSMUST00000197462 507 ntBASIC3.65□□□□□ -1.83
Nkx3-1P97436 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC3.65□□□□□ -1.83
Nkx3-1P97436 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC3.65□□□□□ -1.83
Nkx3-1P97436 Gm7468-201ENSMUST00000203900 652 ntBASIC3.65□□□□□ -1.83
Nkx3-1P97436 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Nkx3-1P97436 AC154738.1-201ENSMUST00000227054 368 ntBASIC3.65□□□□□ -1.83
Nkx3-1P97436 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Nkx3-1P97436 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
Nkx3-1P97436 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC3.65□□□□□ -1.83
Nkx3-1P97436 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Nkx3-1P97436 Gm42455-201ENSMUST00000199761 2736 ntBASIC3.65□□□□□ -1.83
Nkx3-1P97436 Gm45137-201ENSMUST00000208652 4415 ntBASIC3.65□□□□□ -1.83
Nkx3-1P97436 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC3.65□□□□□ -1.83
Nkx3-1P97436 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Nkx3-1P97436 Hm629797-201ENSMUST00000183645 2398 ntBASIC3.65□□□□□ -1.83
Nkx3-1P97436 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Nkx3-1P97436 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Nkx3-1P97436 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Nkx3-1P97436 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC3.64□□□□□ -1.83
Nkx3-1P97436 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Nkx3-1P97436 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
Nkx3-1P97436 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Nkx3-1P97436 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Nkx3-1P97436 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Nkx3-1P97436 Gm14539-201ENSMUST00000117527 174 ntBASIC3.64□□□□□ -1.83
Nkx3-1P97436 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC3.64□□□□□ -1.83
Nkx3-1P97436 Gm14725-201ENSMUST00000120324 828 ntBASIC3.64□□□□□ -1.83
Nkx3-1P97436 Gm12103-201ENSMUST00000121892 362 ntBASIC3.64□□□□□ -1.83
Nkx3-1P97436 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC3.64□□□□□ -1.83
Nkx3-1P97436 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC3.64□□□□□ -1.83
Nkx3-1P97436 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC3.64□□□□□ -1.83
Nkx3-1P97436 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC3.64□□□□□ -1.83
Nkx3-1P97436 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC3.64□□□□□ -1.83
Nkx3-1P97436 Gm37495-201ENSMUST00000194590 264 ntBASIC3.64□□□□□ -1.83
Nkx3-1P97436 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC3.64□□□□□ -1.83
Nkx3-1P97436 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC3.64□□□□□ -1.83
Nkx3-1P97436 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC3.64□□□□□ -1.83
Nkx3-1P97436 Gm43405-201ENSMUST00000198642 337 ntBASIC3.64□□□□□ -1.83
Nkx3-1P97436 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC3.64□□□□□ -1.83
Nkx3-1P97436 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Nkx3-1P97436 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC3.64□□□□□ -1.83
Nkx3-1P97436 Gm45733-201ENSMUST00000212988 437 ntBASIC3.64□□□□□ -1.83
Nkx3-1P97436 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
Nkx3-1P97436 AC153516.1-201ENSMUST00000217955 779 ntBASIC3.64□□□□□ -1.83
Nkx3-1P97436 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC3.64□□□□□ -1.83
Nkx3-1P97436 Gm6562-201ENSMUST00000221903 464 ntBASIC3.64□□□□□ -1.83
Nkx3-1P97436 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC3.64□□□□□ -1.83
Nkx3-1P97436 AC162183.1-202ENSMUST00000225434 904 ntBASIC3.64□□□□□ -1.83
Nkx3-1P97436 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Nkx3-1P97436 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Nkx3-1P97436 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Nkx3-1P97436 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Nkx3-1P97436 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
Nkx3-1P97436 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Nkx3-1P97436 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Nkx3-1P97436 Gm7452-202ENSMUST00000202891 3039 ntBASIC3.64□□□□□ -1.83
Nkx3-1P97436 Gm37569-201ENSMUST00000192111 1722 ntBASIC3.64□□□□□ -1.83
Nkx3-1P97436 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC3.64□□□□□ -1.83
Nkx3-1P97436 AC160130.1-201ENSMUST00000220734 2735 ntBASIC3.64□□□□□ -1.83
Nkx3-1P97436 AC122408.2-201ENSMUST00000217901 1391 ntBASIC3.63□□□□□ -1.83
Nkx3-1P97436 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC3.63□□□□□ -1.83
Nkx3-1P97436 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Nkx3-1P97436 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Nkx3-1P97436 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms