Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm7990-201ENSMUST00000212126 593 ntBASIC5.4□□□□□ -1.54
Nup43P59235 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Nup43P59235 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Nup43P59235 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC5.4□□□□□ -1.54
Nup43P59235 Gm4510-201ENSMUST00000218265 427 ntBASIC5.4□□□□□ -1.54
Nup43P59235 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC5.4□□□□□ -1.54
Nup43P59235 Gm32526-201ENSMUST00000221878 981 ntBASIC5.4□□□□□ -1.54
Nup43P59235 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC5.4□□□□□ -1.54
Nup43P59235 AC167192.2-201ENSMUST00000224794 198 ntBASIC5.4□□□□□ -1.54
Nup43P59235 AC154595.2-201ENSMUST00000225067 310 ntBASIC5.4□□□□□ -1.54
Nup43P59235 AL669819.1-201ENSMUST00000225143 330 ntBASIC5.4□□□□□ -1.54
Nup43P59235 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Nup43P59235 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Nup43P59235 Gm4963-201ENSMUST00000072718 378 ntBASIC5.4□□□□□ -1.54
Nup43P59235 Gm25141-201ENSMUST00000083177 107 ntBASIC5.4□□□□□ -1.54
Nup43P59235 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Nup43P59235 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
Nup43P59235 Gm43745-201ENSMUST00000198085 1883 ntBASIC5.4□□□□□ -1.55
Nup43P59235 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.4□□□□□ -1.55
Nup43P59235 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Nup43P59235 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC5.4□□□□□ -1.55
Nup43P59235 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Nup43P59235 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Nup43P59235 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Nup43P59235 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Nup43P59235 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Nup43P59235 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Nup43P59235 Gm43088-201ENSMUST00000197530 2347 ntBASIC5.4□□□□□ -1.55
Nup43P59235 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Nup43P59235 AC154576.1-202ENSMUST00000223966 3320 ntBASIC5.4□□□□□ -1.55
Nup43P59235 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Nup43P59235 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Nup43P59235 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.39□□□□□ -1.55
Nup43P59235 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Nup43P59235 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC5.39□□□□□ -1.55
Nup43P59235 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Nup43P59235 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
Nup43P59235 AC131667.1-201ENSMUST00000214665 2175 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Nup43P59235 Gm45493-201ENSMUST00000209494 3948 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC5.39□□□□□ -1.55
Nup43P59235 Gm38126-201ENSMUST00000195297 4003 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Gm44586-201ENSMUST00000207166 2737 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Mir680-1-201ENSMUST00000102257 109 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Mir883a-201ENSMUST00000104824 76 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Mir466f-4-201ENSMUST00000116930 121 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Gm11262-201ENSMUST00000119326 833 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Gm15387-201ENSMUST00000120421 648 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Gm15959-201ENSMUST00000121724 368 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Gm22959-201ENSMUST00000122514 303 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Gm25806-201ENSMUST00000122782 122 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Nup43P59235 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC5.39□□□□□ -1.55
Nup43P59235 Gm22819-201ENSMUST00000157445 303 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC5.39□□□□□ -1.55
Nup43P59235 Gm18343-201ENSMUST00000172802 604 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Gm22857-201ENSMUST00000174969 134 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Gm28146-201ENSMUST00000185517 701 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Gm28574-201ENSMUST00000185757 699 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Gm29134-201ENSMUST00000186579 126 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Gm17916-202ENSMUST00000187634 1187 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Gm28397-201ENSMUST00000187970 699 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC5.39□□□□□ -1.55
Nup43P59235 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC5.39□□□□□ -1.55
Nup43P59235 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Nup43P59235 Gm29366-201ENSMUST00000190481 699 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Gm28241-201ENSMUST00000190916 235 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Gm5842-201ENSMUST00000195073 622 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Gm8747-201ENSMUST00000195392 751 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Gm19739-201ENSMUST00000195941 153 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Gm43825-201ENSMUST00000199650 734 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Gm19060-201ENSMUST00000201959 421 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Gm45628-201ENSMUST00000210849 274 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Gm45870-201ENSMUST00000211269 601 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Nup43P59235 AC122858.1-202ENSMUST00000228290 986 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Nup43P59235 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Nup43P59235 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Nup43P59235 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Nup43P59235 Gm24037-201ENSMUST00000082871 180 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Gm5518-201ENSMUST00000084171 648 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC5.39□□□□□ -1.55
Nup43P59235 Gm37086-201ENSMUST00000193082 3452 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Nup43P59235 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Nup43P59235 Gm37773-201ENSMUST00000194141 2120 ntBASIC5.39□□□□□ -1.55
Nup43P59235 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC5.39□□□□□ -1.55
Nup43P59235 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Nup43P59235 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Nup43P59235 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC5.39□□□□□ -1.55
Nup43P59235 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Nup43P59235 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Nup43P59235 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.39□□□□□ -1.55
Nup43P59235 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Nup43P59235 Gm45838-201ENSMUST00000207355 2447 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms