Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Nub1P54729 Gm22867-201ENSMUST00000157499 109 ntBASIC6.21□□□□□ -1.42
Nub1P54729 Gm25439-201ENSMUST00000158280 131 ntBASIC6.21□□□□□ -1.42
Nub1P54729 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC6.21□□□□□ -1.42
Nub1P54729 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Nub1P54729 Gm3216-201ENSMUST00000166927 486 ntBASIC6.21□□□□□ -1.42
Nub1P54729 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Nub1P54729 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC6.21□□□□□ -1.42
Nub1P54729 Mir6238-201ENSMUST00000184140 129 ntBASIC6.21□□□□□ -1.42
Nub1P54729 Gm27210-201ENSMUST00000184263 402 ntBASIC6.21□□□□□ -1.42
Nub1P54729 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC6.21□□□□□ -1.42
Nub1P54729 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC6.21□□□□□ -1.42
Nub1P54729 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Nub1P54729 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC6.21□□□□□ -1.42
Nub1P54729 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC6.21□□□□□ -1.42
Nub1P54729 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC6.21□□□□□ -1.42
Nub1P54729 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC6.21□□□□□ -1.42
Nub1P54729 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC6.21□□□□□ -1.42
Nub1P54729 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC6.21□□□□□ -1.42
Nub1P54729 Gm36501-201ENSMUST00000221857 745 ntBASIC6.21□□□□□ -1.42
Nub1P54729 AC141884.1-201ENSMUST00000226327 636 ntBASIC6.21□□□□□ -1.42
Nub1P54729 AC154436.2-201ENSMUST00000227408 208 ntBASIC6.21□□□□□ -1.42
Nub1P54729 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Nub1P54729 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Nub1P54729 Gm8526-201ENSMUST00000079153 475 ntBASIC6.21□□□□□ -1.42
Nub1P54729 n-R5s69-201ENSMUST00000083872 119 ntBASIC6.21□□□□□ -1.42
Nub1P54729 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
Nub1P54729 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Nub1P54729 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
Nub1P54729 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Nub1P54729 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Nub1P54729 AC102847.2-201ENSMUST00000227799 2906 ntBASIC6.21□□□□□ -1.42
Nub1P54729 Gm37781-201ENSMUST00000194773 3218 ntBASIC6.21□□□□□ -1.42
Nub1P54729 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Nub1P54729 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Nub1P54729 Gm42781-201ENSMUST00000201317 2719 ntBASIC6.2□□□□□ -1.42
Nub1P54729 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Nub1P54729 Gm38451-201ENSMUST00000208329 2646 ntBASIC6.2□□□□□ -1.42
Nub1P54729 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
Nub1P54729 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nub1P54729 Gm42661-201ENSMUST00000202364 1442 ntBASIC6.2□□□□□ -1.42
Nub1P54729 Gm42561-201ENSMUST00000202563 1442 ntBASIC6.2□□□□□ -1.42
Nub1P54729 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nub1P54729 Gm13866-201ENSMUST00000118901 968 ntBASIC6.2□□□□□ -1.42
Nub1P54729 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC6.2□□□□□ -1.42
Nub1P54729 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC6.2□□□□□ -1.42
Nub1P54729 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC6.2□□□□□ -1.42
Nub1P54729 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC6.2□□□□□ -1.42
Nub1P54729 Fth-ps2-201ENSMUST00000168364 516 ntBASIC6.2□□□□□ -1.42
Nub1P54729 Gm4134-201ENSMUST00000173244 563 ntBASIC6.2□□□□□ -1.42
Nub1P54729 Gm24103-201ENSMUST00000174930 77 ntBASIC6.2□□□□□ -1.42
Nub1P54729 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC6.2□□□□□ -1.42
Nub1P54729 Gm5709-201ENSMUST00000177879 1165 ntBASIC6.2□□□□□ -1.42
Nub1P54729 Gm24957-201ENSMUST00000179604 132 ntBASIC6.2□□□□□ -1.42
Nub1P54729 Gm27676-201ENSMUST00000183669 61 ntBASIC6.2□□□□□ -1.42
Nub1P54729 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC6.2□□□□□ -1.42
Nub1P54729 Gm28579-201ENSMUST00000186143 369 ntBASIC6.2□□□□□ -1.42
Nub1P54729 Gm29148-201ENSMUST00000188140 336 ntBASIC6.2□□□□□ -1.42
Nub1P54729 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC6.2□□□□□ -1.42
Nub1P54729 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Nub1P54729 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC6.2□□□□□ -1.42
Nub1P54729 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC6.2□□□□□ -1.42
Nub1P54729 Gm17780-201ENSMUST00000207142 612 ntBASIC6.2□□□□□ -1.42
Nub1P54729 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC6.2□□□□□ -1.42
Nub1P54729 Gm6068-201ENSMUST00000222270 387 ntBASIC6.2□□□□□ -1.42
Nub1P54729 AC139758.1-201ENSMUST00000226573 930 ntBASIC6.2□□□□□ -1.42
Nub1P54729 AC163646.1-201ENSMUST00000227704 397 ntBASIC6.2□□□□□ -1.42
Nub1P54729 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nub1P54729 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nub1P54729 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Nub1P54729 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nub1P54729 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Nub1P54729 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Nub1P54729 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Nub1P54729 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Nub1P54729 Gm38137-201ENSMUST00000193735 1401 ntBASIC6.19□□□□□ -1.42
Nub1P54729 Gm23691-201ENSMUST00000101878 107 ntBASIC6.19□□□□□ -1.42
Nub1P54729 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Nub1P54729 Gm14125-201ENSMUST00000113442 680 ntBASIC6.19□□□□□ -1.42
Nub1P54729 Gm11386-201ENSMUST00000117761 347 ntBASIC6.19□□□□□ -1.42
Nub1P54729 Gm15660-201ENSMUST00000118997 478 ntBASIC6.19□□□□□ -1.42
Nub1P54729 Gm15331-201ENSMUST00000120225 385 ntBASIC6.19□□□□□ -1.42
Nub1P54729 Gm8761-201ENSMUST00000121507 955 ntBASIC6.19□□□□□ -1.42
Nub1P54729 Gm15335-201ENSMUST00000122442 411 ntBASIC6.19□□□□□ -1.42
Nub1P54729 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC6.19□□□□□ -1.42
Nub1P54729 Gm23619-201ENSMUST00000178411 94 ntBASIC6.19□□□□□ -1.42
Nub1P54729 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC6.19□□□□□ -1.42
Nub1P54729 Gm25474-201ENSMUST00000179052 94 ntBASIC6.19□□□□□ -1.42
Nub1P54729 Gm22047-201ENSMUST00000179176 94 ntBASIC6.19□□□□□ -1.42
Nub1P54729 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nub1P54729 Gm27460-201ENSMUST00000184213 100 ntBASIC6.19□□□□□ -1.42
Nub1P54729 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC6.19□□□□□ -1.42
Nub1P54729 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nub1P54729 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC6.19□□□□□ -1.42
Nub1P54729 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nub1P54729 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC6.19□□□□□ -1.42
Nub1P54729 Gm43142-201ENSMUST00000198670 361 ntBASIC6.19□□□□□ -1.42
Nub1P54729 Gm19060-201ENSMUST00000201959 421 ntBASIC6.19□□□□□ -1.42
Nub1P54729 Gm2040-201ENSMUST00000202979 289 ntBASIC6.19□□□□□ -1.42
Nub1P54729 Gm8319-201ENSMUST00000205708 641 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms