Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm23743-201ENSMUST00000157389 274 ntBASIC4.2□□□□□ -1.74
Sox3P53784 Gm23391-201ENSMUST00000157579 104 ntBASIC4.2□□□□□ -1.74
Sox3P53784 Gm25264-201ENSMUST00000158519 117 ntBASIC4.2□□□□□ -1.74
Sox3P53784 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Sox3P53784 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Sox3P53784 Gm23816-201ENSMUST00000179617 132 ntBASIC4.2□□□□□ -1.74
Sox3P53784 Scgb2b6-201ENSMUST00000188132 330 ntBASIC4.2□□□□□ -1.74
Sox3P53784 Gm29097-201ENSMUST00000190273 422 ntBASIC4.2□□□□□ -1.74
Sox3P53784 Gm42830-201ENSMUST00000196642 313 ntBASIC4.2□□□□□ -1.74
Sox3P53784 Gm43559-201ENSMUST00000198755 466 ntBASIC4.2□□□□□ -1.74
Sox3P53784 Igkv8-31-201ENSMUST00000200040 372 ntBASIC4.2□□□□□ -1.74
Sox3P53784 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC4.2□□□□□ -1.74
Sox3P53784 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC4.2□□□□□ -1.74
Sox3P53784 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC4.2□□□□□ -1.74
Sox3P53784 AC122301.1-201ENSMUST00000219625 507 ntBASIC4.2□□□□□ -1.74
Sox3P53784 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC4.2□□□□□ -1.74
Sox3P53784 Gm19134-201ENSMUST00000221203 487 ntBASIC4.2□□□□□ -1.74
Sox3P53784 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.2□□□□□ -1.74
Sox3P53784 AL590503.1-201ENSMUST00000222053 321 ntBASIC4.2□□□□□ -1.74
Sox3P53784 CT571268.1-201ENSMUST00000222320 407 ntBASIC4.2□□□□□ -1.74
Sox3P53784 AC154510.1-201ENSMUST00000223925 737 ntBASIC4.2□□□□□ -1.74
Sox3P53784 AC124562.1-201ENSMUST00000224673 337 ntBASIC4.2□□□□□ -1.74
Sox3P53784 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Sox3P53784 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Sox3P53784 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Sox3P53784 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.2□□□□□ -1.74
Sox3P53784 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
Sox3P53784 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Sox3P53784 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Sox3P53784 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.2□□□□□ -1.74
Sox3P53784 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
Sox3P53784 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Sox3P53784 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Sox3P53784 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Sox3P53784 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Sox3P53784 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.19□□□□□ -1.74
Sox3P53784 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Sox3P53784 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Sox3P53784 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Sox3P53784 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.19□□□□□ -1.74
Sox3P53784 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Sox3P53784 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Sox3P53784 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Sox3P53784 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.19□□□□□ -1.74
Sox3P53784 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Sox3P53784 Gm12062-201ENSMUST00000117533 259 ntBASIC4.19□□□□□ -1.74
Sox3P53784 Gm12311-201ENSMUST00000118803 374 ntBASIC4.19□□□□□ -1.74
Sox3P53784 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
Sox3P53784 Gm11448-201ENSMUST00000120427 450 ntBASIC4.19□□□□□ -1.74
Sox3P53784 Defa-ps5-201ENSMUST00000121541 279 ntBASIC4.19□□□□□ -1.74
Sox3P53784 Gm25572-201ENSMUST00000157527 172 ntBASIC4.19□□□□□ -1.74
Sox3P53784 Gm23855-201ENSMUST00000158377 135 ntBASIC4.19□□□□□ -1.74
Sox3P53784 Gm22940-201ENSMUST00000158560 155 ntBASIC4.19□□□□□ -1.74
Sox3P53784 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC4.19□□□□□ -1.74
Sox3P53784 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC4.19□□□□□ -1.74
Sox3P53784 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC4.19□□□□□ -1.74
Sox3P53784 Gm5058-201ENSMUST00000187331 463 ntBASIC4.19□□□□□ -1.74
Sox3P53784 Gm28654-201ENSMUST00000189801 379 ntBASIC4.19□□□□□ -1.74
Sox3P53784 Gm38201-201ENSMUST00000192143 387 ntBASIC4.19□□□□□ -1.74
Sox3P53784 Gm44354-201ENSMUST00000196017 143 ntBASIC4.19□□□□□ -1.74
Sox3P53784 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.19□□□□□ -1.74
Sox3P53784 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Sox3P53784 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC4.19□□□□□ -1.74
Sox3P53784 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Sox3P53784 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC4.19□□□□□ -1.74
Sox3P53784 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Sox3P53784 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Sox3P53784 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Sox3P53784 Gm43871-201ENSMUST00000204931 1955 ntBASIC4.19□□□□□ -1.74
Sox3P53784 AC113059.2-201ENSMUST00000213462 3016 ntBASIC4.19□□□□□ -1.74
Sox3P53784 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Sox3P53784 Neat1-201ENSMUST00000173672 20771 ntBASIC4.19□□□□□ -1.74
Sox3P53784 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Sox3P53784 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Sox3P53784 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Sox3P53784 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
Sox3P53784 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
Sox3P53784 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Sox3P53784 Gm5391-201ENSMUST00000121155 613 ntBASIC4.18□□□□□ -1.74
Sox3P53784 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC4.18□□□□□ -1.74
Sox3P53784 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC4.18□□□□□ -1.74
Sox3P53784 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Sox3P53784 Gm23902-201ENSMUST00000157571 134 ntBASIC4.18□□□□□ -1.74
Sox3P53784 Gm23865-201ENSMUST00000157723 97 ntBASIC4.18□□□□□ -1.74
Sox3P53784 Gm22158-201ENSMUST00000158411 126 ntBASIC4.18□□□□□ -1.74
Sox3P53784 Gm24664-201ENSMUST00000158939 100 ntBASIC4.18□□□□□ -1.74
Sox3P53784 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Sox3P53784 Gm6650-201ENSMUST00000166710 614 ntBASIC4.18□□□□□ -1.74
Sox3P53784 Gm29588-201ENSMUST00000185738 298 ntBASIC4.18□□□□□ -1.74
Sox3P53784 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC4.18□□□□□ -1.74
Sox3P53784 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC4.18□□□□□ -1.74
Sox3P53784 Gm4248-201ENSMUST00000196905 316 ntBASIC4.18□□□□□ -1.74
Sox3P53784 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC4.18□□□□□ -1.74
Sox3P53784 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC4.18□□□□□ -1.74
Sox3P53784 Gm6230-201ENSMUST00000208077 780 ntBASIC4.18□□□□□ -1.74
Sox3P53784 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Sox3P53784 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Sox3P53784 Gm8106-201ENSMUST00000213123 523 ntBASIC4.18□□□□□ -1.74
Sox3P53784 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Sox3P53784 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC4.18□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms