Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC5.57□□□□□ -1.52
Usp4P35123 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Usp4P35123 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.57□□□□□ -1.52
Usp4P35123 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC5.57□□□□□ -1.52
Usp4P35123 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Usp4P35123 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Usp4P35123 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.57□□□□□ -1.52
Usp4P35123 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Usp4P35123 Gm37760-201ENSMUST00000194726 3841 ntBASIC5.57□□□□□ -1.52
Usp4P35123 Gm43333-201ENSMUST00000198340 2262 ntBASIC5.57□□□□□ -1.52
Usp4P35123 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Usp4P35123 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Usp4P35123 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Usp4P35123 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Usp4P35123 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Usp4P35123 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Usp4P35123 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Usp4P35123 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Usp4P35123 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Usp4P35123 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Usp4P35123 AC174797.3-203ENSMUST00000225749 2078 ntBASIC5.56□□□□□ -1.52
Usp4P35123 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Usp4P35123 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.56□□□□□ -1.52
Usp4P35123 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Usp4P35123 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC5.56□□□□□ -1.52
Usp4P35123 Gm15531-201ENSMUST00000118062 252 ntBASIC5.56□□□□□ -1.52
Usp4P35123 Gm15916-201ENSMUST00000118355 736 ntBASIC5.56□□□□□ -1.52
Usp4P35123 Gm15772-201ENSMUST00000118533 438 ntBASIC5.56□□□□□ -1.52
Usp4P35123 Gm13162-201ENSMUST00000121481 454 ntBASIC5.56□□□□□ -1.52
Usp4P35123 Gm11804-201ENSMUST00000121663 468 ntBASIC5.56□□□□□ -1.52
Usp4P35123 Gm16274-201ENSMUST00000139251 592 ntBASIC5.56□□□□□ -1.52
Usp4P35123 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC5.56□□□□□ -1.52
Usp4P35123 Gm22733-201ENSMUST00000158094 91 ntBASIC5.56□□□□□ -1.52
Usp4P35123 Gm23354-201ENSMUST00000158426 104 ntBASIC5.56□□□□□ -1.52
Usp4P35123 Gm24175-201ENSMUST00000158931 129 ntBASIC5.56□□□□□ -1.52
Usp4P35123 Gm17030-201ENSMUST00000167016 393 ntBASIC5.56□□□□□ -1.52
Usp4P35123 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Usp4P35123 Gm4617-201ENSMUST00000178993 331 ntBASIC5.56□□□□□ -1.52
Usp4P35123 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Usp4P35123 Gm28596-201ENSMUST00000185870 696 ntBASIC5.56□□□□□ -1.52
Usp4P35123 Gm28802-201ENSMUST00000188624 944 ntBASIC5.56□□□□□ -1.52
Usp4P35123 Gm32295-201ENSMUST00000192558 696 ntBASIC5.56□□□□□ -1.52
Usp4P35123 Gm31260-201ENSMUST00000193478 696 ntBASIC5.56□□□□□ -1.52
Usp4P35123 Gm43516-201ENSMUST00000196891 322 ntBASIC5.56□□□□□ -1.52
Usp4P35123 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Usp4P35123 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC5.56□□□□□ -1.52
Usp4P35123 Gm44820-201ENSMUST00000207420 396 ntBASIC5.56□□□□□ -1.52
Usp4P35123 Gm36371-201ENSMUST00000209043 1103 ntBASIC5.56□□□□□ -1.52
Usp4P35123 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC5.56□□□□□ -1.52
Usp4P35123 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC5.56□□□□□ -1.52
Usp4P35123 Gm6171-201ENSMUST00000220760 645 ntBASIC5.56□□□□□ -1.52
Usp4P35123 AC117237.1-201ENSMUST00000224035 395 ntBASIC5.56□□□□□ -1.52
Usp4P35123 CT025579.3-201ENSMUST00000224543 451 ntBASIC5.56□□□□□ -1.52
Usp4P35123 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Usp4P35123 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
Usp4P35123 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Usp4P35123 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Usp4P35123 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Usp4P35123 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Usp4P35123 Gm25682-201ENSMUST00000083942 164 ntBASIC5.56□□□□□ -1.52
Usp4P35123 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Usp4P35123 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Usp4P35123 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Usp4P35123 AC112274.1-201ENSMUST00000218957 4274 ntBASIC5.56□□□□□ -1.52
Usp4P35123 Gm18163-201ENSMUST00000197877 1643 ntBASIC5.56□□□□□ -1.52
Usp4P35123 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Usp4P35123 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Usp4P35123 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Usp4P35123 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC5.55□□□□□ -1.52
Usp4P35123 Gm3665-201ENSMUST00000177214 2461 ntBASIC5.55□□□□□ -1.52
Usp4P35123 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC5.55□□□□□ -1.52
Usp4P35123 Gm35629-201ENSMUST00000209684 2241 ntBASIC5.55□□□□□ -1.52
Usp4P35123 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC5.55□□□□□ -1.52
Usp4P35123 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Usp4P35123 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Usp4P35123 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Usp4P35123 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
Usp4P35123 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC5.55□□□□□ -1.52
Usp4P35123 Gm14050-201ENSMUST00000117052 346 ntBASIC5.55□□□□□ -1.52
Usp4P35123 Gm11488-201ENSMUST00000117277 863 ntBASIC5.55□□□□□ -1.52
Usp4P35123 Gm13803-201ENSMUST00000117547 489 ntBASIC5.55□□□□□ -1.52
Usp4P35123 Gm11908-201ENSMUST00000117755 347 ntBASIC5.55□□□□□ -1.52
Usp4P35123 Gm14785-201ENSMUST00000120185 539 ntBASIC5.55□□□□□ -1.52
Usp4P35123 Gm12607-201ENSMUST00000120724 493 ntBASIC5.55□□□□□ -1.52
Usp4P35123 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC5.55□□□□□ -1.52
Usp4P35123 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC5.55□□□□□ -1.52
Usp4P35123 Gm25559-201ENSMUST00000157182 74 ntBASIC5.55□□□□□ -1.52
Usp4P35123 Scarna6-201ENSMUST00000158656 265 ntBASIC5.55□□□□□ -1.52
Usp4P35123 Ear-ps7-201ENSMUST00000161287 442 ntBASIC5.55□□□□□ -1.52
Usp4P35123 Gm21999-201ENSMUST00000165985 387 ntBASIC5.55□□□□□ -1.52
Usp4P35123 Gm6673-201ENSMUST00000166114 700 ntBASIC5.55□□□□□ -1.52
Usp4P35123 Gm20462-201ENSMUST00000172623 408 ntBASIC5.55□□□□□ -1.52
Usp4P35123 Gm20519-201ENSMUST00000173684 359 ntBASIC5.55□□□□□ -1.52
Usp4P35123 Mir3090-201ENSMUST00000175597 87 ntBASIC5.55□□□□□ -1.52
Usp4P35123 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.55□□□□□ -1.52
Usp4P35123 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC5.55□□□□□ -1.52
Usp4P35123 Gm27036-201ENSMUST00000182465 980 ntBASIC5.55□□□□□ -1.52
Usp4P35123 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC5.55□□□□□ -1.52
Usp4P35123 Gm27985-201ENSMUST00000185112 378 ntBASIC5.55□□□□□ -1.52
Usp4P35123 Gm18667-201ENSMUST00000186523 484 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 92.2 ms