Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Col2a1P28481 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Col2a1P28481 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
Col2a1P28481 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.58□□□□□ -1.68
Col2a1P28481 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Col2a1P28481 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Col2a1P28481 Gm23175-201ENSMUST00000104371 132 ntBASIC4.58□□□□□ -1.68
Col2a1P28481 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC4.58□□□□□ -1.68
Col2a1P28481 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC4.58□□□□□ -1.68
Col2a1P28481 Gm15364-201ENSMUST00000119618 585 ntBASIC4.58□□□□□ -1.68
Col2a1P28481 Gm3788-201ENSMUST00000119949 136 ntBASIC4.58□□□□□ -1.68
Col2a1P28481 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Col2a1P28481 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Col2a1P28481 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC4.58□□□□□ -1.68
Col2a1P28481 Gm4036-201ENSMUST00000220842 626 ntBASIC4.58□□□□□ -1.68
Col2a1P28481 AC119573.1-201ENSMUST00000227960 757 ntBASIC4.58□□□□□ -1.68
Col2a1P28481 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Col2a1P28481 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Col2a1P28481 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Col2a1P28481 Gm37176-201ENSMUST00000193300 4051 ntBASIC4.58□□□□□ -1.68
Col2a1P28481 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Col2a1P28481 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Col2a1P28481 Gm14886-201ENSMUST00000117208 2629 ntBASIC4.58□□□□□ -1.68
Col2a1P28481 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Col2a1P28481 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Col2a1P28481 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Col2a1P28481 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col2a1P28481 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.57□□□□□ -1.68
Col2a1P28481 Defa-ps5-201ENSMUST00000121541 279 ntBASIC4.57□□□□□ -1.68
Col2a1P28481 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC4.57□□□□□ -1.68
Col2a1P28481 Gm6058-201ENSMUST00000154261 399 ntBASIC4.57□□□□□ -1.68
Col2a1P28481 Gm27033-201ENSMUST00000183226 544 ntBASIC4.57□□□□□ -1.68
Col2a1P28481 Gm8502-201ENSMUST00000185708 901 ntBASIC4.57□□□□□ -1.68
Col2a1P28481 Gm21147-201ENSMUST00000186046 913 ntBASIC4.57□□□□□ -1.68
Col2a1P28481 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC4.57□□□□□ -1.68
Col2a1P28481 Gm34779-201ENSMUST00000210036 263 ntBASIC4.57□□□□□ -1.68
Col2a1P28481 Gm39197-201ENSMUST00000212069 457 ntBASIC4.57□□□□□ -1.68
Col2a1P28481 CT485612.3-201ENSMUST00000222179 408 ntBASIC4.57□□□□□ -1.68
Col2a1P28481 AC140209.1-201ENSMUST00000227875 284 ntBASIC4.57□□□□□ -1.68
Col2a1P28481 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col2a1P28481 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC4.57□□□□□ -1.68
Col2a1P28481 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Col2a1P28481 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col2a1P28481 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Col2a1P28481 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col2a1P28481 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col2a1P28481 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col2a1P28481 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Col2a1P28481 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Col2a1P28481 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Col2a1P28481 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC4.57□□□□□ -1.68
Col2a1P28481 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.56□□□□□ -1.68
Col2a1P28481 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Col2a1P28481 Gm25168-201ENSMUST00000104189 132 ntBASIC4.56□□□□□ -1.68
Col2a1P28481 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Col2a1P28481 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Col2a1P28481 Gm7497-201ENSMUST00000183064 1003 ntBASIC4.56□□□□□ -1.68
Col2a1P28481 Gm27189-201ENSMUST00000184119 190 ntBASIC4.56□□□□□ -1.68
Col2a1P28481 Gm28660-201ENSMUST00000186496 253 ntBASIC4.56□□□□□ -1.68
Col2a1P28481 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC4.56□□□□□ -1.68
Col2a1P28481 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC4.56□□□□□ -1.68
Col2a1P28481 Gm37241-201ENSMUST00000191736 523 ntBASIC4.56□□□□□ -1.68
Col2a1P28481 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC4.56□□□□□ -1.68
Col2a1P28481 Gm36371-201ENSMUST00000209043 1103 ntBASIC4.56□□□□□ -1.68
Col2a1P28481 Gm7034-201ENSMUST00000218638 645 ntBASIC4.56□□□□□ -1.68
Col2a1P28481 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Col2a1P28481 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC4.56□□□□□ -1.68
Col2a1P28481 Mir30e-201ENSMUST00000083475 92 ntBASIC4.56□□□□□ -1.68
Col2a1P28481 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
Col2a1P28481 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col2a1P28481 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col2a1P28481 Gm37053-201ENSMUST00000192399 2087 ntBASIC4.56□□□□□ -1.68
Col2a1P28481 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col2a1P28481 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col2a1P28481 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col2a1P28481 Gm25833-201ENSMUST00000104137 133 ntBASIC4.56□□□□□ -1.68
Col2a1P28481 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
Col2a1P28481 Gm15268-201ENSMUST00000118845 352 ntBASIC4.56□□□□□ -1.68
Col2a1P28481 Gm12335-201ENSMUST00000119738 327 ntBASIC4.56□□□□□ -1.68
Col2a1P28481 Gm11982-201ENSMUST00000121480 314 ntBASIC4.56□□□□□ -1.68
Col2a1P28481 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Col2a1P28481 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Col2a1P28481 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Col2a1P28481 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC4.56□□□□□ -1.68
Col2a1P28481 Mir6408-201ENSMUST00000183643 91 ntBASIC4.56□□□□□ -1.68
Col2a1P28481 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col2a1P28481 Gm19891-201ENSMUST00000189771 303 ntBASIC4.56□□□□□ -1.68
Col2a1P28481 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC4.56□□□□□ -1.68
Col2a1P28481 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC4.56□□□□□ -1.68
Col2a1P28481 n-TSaga9-201ENSMUST00000197675 107 ntBASIC4.56□□□□□ -1.68
Col2a1P28481 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC4.56□□□□□ -1.68
Col2a1P28481 Gm43028-201ENSMUST00000202561 481 ntBASIC4.56□□□□□ -1.68
Col2a1P28481 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC4.56□□□□□ -1.68
Col2a1P28481 Gm45162-201ENSMUST00000209013 618 ntBASIC4.56□□□□□ -1.68
Col2a1P28481 Gm6991-201ENSMUST00000218475 1178 ntBASIC4.56□□□□□ -1.68
Col2a1P28481 AL645546.1-201ENSMUST00000225001 189 ntBASIC4.56□□□□□ -1.68
Col2a1P28481 AC134864.1-201ENSMUST00000226326 511 ntBASIC4.56□□□□□ -1.68
Col2a1P28481 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Col2a1P28481 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Col2a1P28481 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms