Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Sdc1P18828 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC3.52□□□□□ -1.85
Sdc1P18828 Mir5098-201ENSMUST00000175320 82 ntBASIC3.52□□□□□ -1.85
Sdc1P18828 Gm29525-201ENSMUST00000189844 699 ntBASIC3.52□□□□□ -1.85
Sdc1P18828 Gm29523-201ENSMUST00000191415 699 ntBASIC3.52□□□□□ -1.85
Sdc1P18828 Trbv28-201ENSMUST00000192804 264 ntBASIC3.52□□□□□ -1.85
Sdc1P18828 Gm43037-201ENSMUST00000196808 250 ntBASIC3.52□□□□□ -1.85
Sdc1P18828 Gm43768-201ENSMUST00000198380 1258 ntBASIC3.52□□□□□ -1.85
Sdc1P18828 Mir7682-201ENSMUST00000198467 58 ntBASIC3.52□□□□□ -1.85
Sdc1P18828 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC3.52□□□□□ -1.85
Sdc1P18828 Gm43894-201ENSMUST00000203274 688 ntBASIC3.52□□□□□ -1.85
Sdc1P18828 Gm44865-201ENSMUST00000207240 531 ntBASIC3.52□□□□□ -1.85
Sdc1P18828 Gm45735-201ENSMUST00000212779 319 ntBASIC3.52□□□□□ -1.85
Sdc1P18828 AC166902.1-201ENSMUST00000216653 517 ntBASIC3.52□□□□□ -1.85
Sdc1P18828 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC3.52□□□□□ -1.85
Sdc1P18828 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Sdc1P18828 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC3.52□□□□□ -1.85
Sdc1P18828 Gm18441-201ENSMUST00000223539 617 ntBASIC3.52□□□□□ -1.85
Sdc1P18828 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Sdc1P18828 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Sdc1P18828 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Sdc1P18828 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Sdc1P18828 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Sdc1P18828 Gm25800-201ENSMUST00000082636 134 ntBASIC3.52□□□□□ -1.85
Sdc1P18828 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Sdc1P18828 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Sdc1P18828 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Sdc1P18828 Gm36931-201ENSMUST00000192997 4801 ntBASIC3.52□□□□□ -1.85
Sdc1P18828 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
Sdc1P18828 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Sdc1P18828 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC3.52□□□□□ -1.85
Sdc1P18828 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Sdc1P18828 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
Sdc1P18828 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC3.52□□□□□ -1.85
Sdc1P18828 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Sdc1P18828 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Sdc1P18828 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
Sdc1P18828 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
Sdc1P18828 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Sdc1P18828 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
Sdc1P18828 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
Sdc1P18828 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Sdc1P18828 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Sdc1P18828 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
Sdc1P18828 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Sdc1P18828 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 Gm13607-201ENSMUST00000117875 539 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 Gm11822-201ENSMUST00000119177 415 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 Gm11805-201ENSMUST00000121238 600 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 Gm5123-201ENSMUST00000121905 837 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC3.51□□□□□ -1.85
Sdc1P18828 Gm5755-201ENSMUST00000152394 837 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 Gm26098-201ENSMUST00000157247 288 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Sdc1P18828 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Sdc1P18828 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Sdc1P18828 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Sdc1P18828 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Sdc1P18828 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Sdc1P18828 Gm17075-201ENSMUST00000171924 670 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Sdc1P18828 Gm24300-201ENSMUST00000177809 109 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Sdc1P18828 Gm24017-201ENSMUST00000178726 109 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 Gm23952-201ENSMUST00000179380 109 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 Gm26828-201ENSMUST00000180640 172 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 Gm9499-201ENSMUST00000180888 964 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.51□□□□□ -1.85
Sdc1P18828 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
Sdc1P18828 Mir7082-201ENSMUST00000183526 92 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 Mir6244-201ENSMUST00000184156 117 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC3.51□□□□□ -1.85
Sdc1P18828 Gm37111-201ENSMUST00000193250 634 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 Gm7182-201ENSMUST00000193351 732 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 Gm33973-201ENSMUST00000195148 534 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 Gm43345-201ENSMUST00000199484 269 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC3.51□□□□□ -1.85
Sdc1P18828 Gm34272-201ENSMUST00000208886 253 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 Gm45660-201ENSMUST00000210267 151 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Sdc1P18828 AC122901.2-201ENSMUST00000216926 285 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 Gm7530-201ENSMUST00000218466 605 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 Gm18442-201ENSMUST00000220925 639 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 AC140210.1-201ENSMUST00000224961 534 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 AC139758.1-201ENSMUST00000226573 930 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 AC132833.3-201ENSMUST00000227472 866 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Sdc1P18828 Mir298-201ENSMUST00000083476 82 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 Gm22868-201ENSMUST00000083955 164 ntBASIC3.51□□□□□ -1.85
Sdc1P18828 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Sdc1P18828 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Sdc1P18828 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms