Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RaraP11416 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RaraP11416 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
RaraP11416 Gm5925-201ENSMUST00000105016 1497 ntBASIC6.16□□□□□ -1.42
RaraP11416 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC6.16□□□□□ -1.42
RaraP11416 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
RaraP11416 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
RaraP11416 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
RaraP11416 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
RaraP11416 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RaraP11416 Gm14163-201ENSMUST00000117342 217 ntBASIC6.16□□□□□ -1.42
RaraP11416 Gm14750-201ENSMUST00000118262 516 ntBASIC6.16□□□□□ -1.42
RaraP11416 Gm4853-201ENSMUST00000119359 394 ntBASIC6.16□□□□□ -1.42
RaraP11416 Gm12494-201ENSMUST00000121684 521 ntBASIC6.16□□□□□ -1.42
RaraP11416 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC6.16□□□□□ -1.42
RaraP11416 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC6.16□□□□□ -1.42
RaraP11416 Gm22223-201ENSMUST00000157360 125 ntBASIC6.16□□□□□ -1.42
RaraP11416 Gm22819-201ENSMUST00000157445 303 ntBASIC6.16□□□□□ -1.42
RaraP11416 Gm22916-201ENSMUST00000157616 119 ntBASIC6.16□□□□□ -1.42
RaraP11416 Gm22160-201ENSMUST00000158405 328 ntBASIC6.16□□□□□ -1.42
RaraP11416 Gm24767-201ENSMUST00000158509 95 ntBASIC6.16□□□□□ -1.42
RaraP11416 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC6.16□□□□□ -1.42
RaraP11416 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
RaraP11416 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC6.16□□□□□ -1.42
RaraP11416 Gm22857-201ENSMUST00000174969 134 ntBASIC6.16□□□□□ -1.42
RaraP11416 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
RaraP11416 Gm28146-201ENSMUST00000185517 701 ntBASIC6.16□□□□□ -1.42
RaraP11416 Gm28574-201ENSMUST00000185757 699 ntBASIC6.16□□□□□ -1.42
RaraP11416 Gm28397-201ENSMUST00000187970 699 ntBASIC6.16□□□□□ -1.42
RaraP11416 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC6.16□□□□□ -1.42
RaraP11416 Gm29366-201ENSMUST00000190481 699 ntBASIC6.16□□□□□ -1.42
RaraP11416 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC6.16□□□□□ -1.42
RaraP11416 Gm37189-201ENSMUST00000192131 298 ntBASIC6.16□□□□□ -1.42
RaraP11416 Gm38040-201ENSMUST00000193505 225 ntBASIC6.16□□□□□ -1.42
RaraP11416 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC6.16□□□□□ -1.42
RaraP11416 Gm44125-201ENSMUST00000203068 448 ntBASIC6.16□□□□□ -1.42
RaraP11416 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC6.16□□□□□ -1.42
RaraP11416 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC6.16□□□□□ -1.42
RaraP11416 Gm45596-201ENSMUST00000209279 434 ntBASIC6.16□□□□□ -1.42
RaraP11416 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RaraP11416 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC6.16□□□□□ -1.42
RaraP11416 AC133203.1-201ENSMUST00000228241 301 ntBASIC6.16□□□□□ -1.42
RaraP11416 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
RaraP11416 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
RaraP11416 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
RaraP11416 Gm4963-201ENSMUST00000072718 378 ntBASIC6.16□□□□□ -1.42
RaraP11416 n-R5s161-201ENSMUST00000083728 114 ntBASIC6.16□□□□□ -1.42
RaraP11416 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RaraP11416 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
RaraP11416 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC6.16□□□□□ -1.42
RaraP11416 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
RaraP11416 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
RaraP11416 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RaraP11416 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
RaraP11416 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RaraP11416 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
RaraP11416 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RaraP11416 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RaraP11416 Gm38375-201ENSMUST00000194610 2227 ntBASIC6.15□□□□□ -1.42
RaraP11416 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RaraP11416 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC6.15□□□□□ -1.42
RaraP11416 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC6.15□□□□□ -1.42
RaraP11416 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
RaraP11416 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
RaraP11416 Gm18716-201ENSMUST00000204507 1603 ntBASIC6.15□□□□□ -1.42
RaraP11416 Mir883a-201ENSMUST00000104824 76 ntBASIC6.15□□□□□ -1.42
RaraP11416 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC6.15□□□□□ -1.42
RaraP11416 Gm14558-201ENSMUST00000117458 381 ntBASIC6.15□□□□□ -1.42
RaraP11416 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC6.15□□□□□ -1.42
RaraP11416 Gm14292-201ENSMUST00000118761 456 ntBASIC6.15□□□□□ -1.42
RaraP11416 Gm14115-201ENSMUST00000119242 482 ntBASIC6.15□□□□□ -1.42
RaraP11416 Gm22208-201ENSMUST00000122658 110 ntBASIC6.15□□□□□ -1.42
RaraP11416 Gm25294-201ENSMUST00000122791 104 ntBASIC6.15□□□□□ -1.42
RaraP11416 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RaraP11416 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC6.15□□□□□ -1.42
RaraP11416 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC6.15□□□□□ -1.42
RaraP11416 Gm22216-201ENSMUST00000157557 114 ntBASIC6.15□□□□□ -1.42
RaraP11416 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RaraP11416 Gm20673-201ENSMUST00000177167 430 ntBASIC6.15□□□□□ -1.42
RaraP11416 Gm20620-201ENSMUST00000177528 168 ntBASIC6.15□□□□□ -1.42
RaraP11416 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC6.15□□□□□ -1.42
RaraP11416 Gm26556-201ENSMUST00000180645 320 ntBASIC6.15□□□□□ -1.42
RaraP11416 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RaraP11416 Gm27676-201ENSMUST00000183669 61 ntBASIC6.15□□□□□ -1.42
RaraP11416 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RaraP11416 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RaraP11416 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RaraP11416 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC6.15□□□□□ -1.42
RaraP11416 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RaraP11416 Gm29524-201ENSMUST00000190819 699 ntBASIC6.15□□□□□ -1.42
RaraP11416 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC6.15□□□□□ -1.42
RaraP11416 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RaraP11416 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RaraP11416 Gm42961-201ENSMUST00000202023 181 ntBASIC6.15□□□□□ -1.42
RaraP11416 Gm2602-201ENSMUST00000202112 571 ntBASIC6.15□□□□□ -1.42
RaraP11416 Gm9278-201ENSMUST00000205508 553 ntBASIC6.15□□□□□ -1.42
RaraP11416 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RaraP11416 Gm31166-201ENSMUST00000209326 288 ntBASIC6.15□□□□□ -1.42
RaraP11416 Gm45870-201ENSMUST00000211269 601 ntBASIC6.15□□□□□ -1.42
RaraP11416 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms