Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm24281-201ENSMUST00000104234 136 ntBASIC5.05□□□□□ -1.6
Col3a1P08121 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col3a1P08121 Gm25317-201ENSMUST00000116824 129 ntBASIC5.05□□□□□ -1.6
Col3a1P08121 Gm13341-201ENSMUST00000120780 672 ntBASIC5.05□□□□□ -1.6
Col3a1P08121 Gm26005-201ENSMUST00000158802 134 ntBASIC5.05□□□□□ -1.6
Col3a1P08121 Gm7241-201ENSMUST00000159853 357 ntBASIC5.05□□□□□ -1.6
Col3a1P08121 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col3a1P08121 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col3a1P08121 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC5.05□□□□□ -1.6
Col3a1P08121 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC5.05□□□□□ -1.6
Col3a1P08121 Gm17953-201ENSMUST00000192061 667 ntBASIC5.05□□□□□ -1.6
Col3a1P08121 Gm38061-201ENSMUST00000192490 365 ntBASIC5.05□□□□□ -1.6
Col3a1P08121 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col3a1P08121 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC5.05□□□□□ -1.6
Col3a1P08121 Gm46436-201ENSMUST00000221851 1294 ntBASIC5.05□□□□□ -1.6
Col3a1P08121 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Col3a1P08121 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC5.05□□□□□ -1.6
Col3a1P08121 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Col3a1P08121 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Col3a1P08121 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col3a1P08121 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Col3a1P08121 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col3a1P08121 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Col3a1P08121 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC5.04□□□□□ -1.6
Col3a1P08121 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col3a1P08121 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col3a1P08121 Gm37053-201ENSMUST00000192399 2087 ntBASIC5.04□□□□□ -1.6
Col3a1P08121 Gm25414-201ENSMUST00000101814 107 ntBASIC5.04□□□□□ -1.6
Col3a1P08121 Gm13268-201ENSMUST00000117485 433 ntBASIC5.04□□□□□ -1.6
Col3a1P08121 Gm12105-201ENSMUST00000120846 779 ntBASIC5.04□□□□□ -1.6
Col3a1P08121 Gm13852-201ENSMUST00000122350 242 ntBASIC5.04□□□□□ -1.6
Col3a1P08121 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col3a1P08121 Gm4487-201ENSMUST00000150617 442 ntBASIC5.04□□□□□ -1.6
Col3a1P08121 Gm23499-201ENSMUST00000157736 268 ntBASIC5.04□□□□□ -1.6
Col3a1P08121 Gm25971-201ENSMUST00000158953 286 ntBASIC5.04□□□□□ -1.6
Col3a1P08121 Gm4540-201ENSMUST00000170669 429 ntBASIC5.04□□□□□ -1.6
Col3a1P08121 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC5.04□□□□□ -1.6
Col3a1P08121 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC5.04□□□□□ -1.6
Col3a1P08121 Gm29097-201ENSMUST00000190273 422 ntBASIC5.04□□□□□ -1.6
Col3a1P08121 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC5.04□□□□□ -1.6
Col3a1P08121 Gm4248-201ENSMUST00000196905 316 ntBASIC5.04□□□□□ -1.6
Col3a1P08121 Gm43044-201ENSMUST00000198091 379 ntBASIC5.04□□□□□ -1.6
Col3a1P08121 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC5.04□□□□□ -1.6
Col3a1P08121 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC5.04□□□□□ -1.6
Col3a1P08121 AC161456.1-201ENSMUST00000206771 887 ntBASIC5.04□□□□□ -1.6
Col3a1P08121 AC159244.1-201ENSMUST00000220964 594 ntBASIC5.04□□□□□ -1.6
Col3a1P08121 AC102352.1-201ENSMUST00000224187 582 ntBASIC5.04□□□□□ -1.6
Col3a1P08121 AC154738.1-201ENSMUST00000227054 368 ntBASIC5.04□□□□□ -1.6
Col3a1P08121 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col3a1P08121 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Col3a1P08121 Gm26437-201ENSMUST00000082595 105 ntBASIC5.04□□□□□ -1.6
Col3a1P08121 Gm8674-201ENSMUST00000179367 3047 ntBASIC5.04□□□□□ -1.6
Col3a1P08121 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col3a1P08121 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col3a1P08121 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col3a1P08121 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Col3a1P08121 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col3a1P08121 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Col3a1P08121 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC5.03□□□□□ -1.6
Col3a1P08121 Gm45137-201ENSMUST00000208652 4415 ntBASIC5.03□□□□□ -1.6
Col3a1P08121 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col3a1P08121 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Col3a1P08121 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Col3a1P08121 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Col3a1P08121 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC5.03□□□□□ -1.6
Col3a1P08121 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
Col3a1P08121 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC5.03□□□□□ -1.6
Col3a1P08121 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Col3a1P08121 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col3a1P08121 Gm24949-201ENSMUST00000183609 215 ntBASIC5.03□□□□□ -1.6
Col3a1P08121 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC5.03□□□□□ -1.6
Col3a1P08121 Gm27190-201ENSMUST00000184890 542 ntBASIC5.03□□□□□ -1.6
Col3a1P08121 Gm37599-201ENSMUST00000193067 489 ntBASIC5.03□□□□□ -1.6
Col3a1P08121 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col3a1P08121 Gm4644-201ENSMUST00000197587 400 ntBASIC5.03□□□□□ -1.6
Col3a1P08121 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col3a1P08121 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC5.03□□□□□ -1.6
Col3a1P08121 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC5.03□□□□□ -1.6
Col3a1P08121 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC5.03□□□□□ -1.6
Col3a1P08121 AL645546.2-201ENSMUST00000224526 265 ntBASIC5.03□□□□□ -1.6
Col3a1P08121 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col3a1P08121 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Col3a1P08121 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Col3a1P08121 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Col3a1P08121 Fus-202ENSMUST00000079045 2623 ntBASIC5.03□□□□□ -1.6
Col3a1P08121 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Col3a1P08121 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Col3a1P08121 Gm45131-201ENSMUST00000208051 2582 ntBASIC5.03□□□□□ -1.6
Col3a1P08121 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col3a1P08121 AC131068.3-201ENSMUST00000228438 1456 ntBASIC5.03□□□□□ -1.6
Col3a1P08121 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
Col3a1P08121 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Col3a1P08121 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col3a1P08121 Gm42968-201ENSMUST00000198578 1372 ntBASIC5.03□□□□□ -1.6
Col3a1P08121 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Col3a1P08121 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
Col3a1P08121 Gm14299-201ENSMUST00000117586 397 ntBASIC5.02□□□□□ -1.61
Col3a1P08121 Gm14775-201ENSMUST00000122089 310 ntBASIC5.02□□□□□ -1.61
Col3a1P08121 Gm12998-201ENSMUST00000122445 789 ntBASIC5.02□□□□□ -1.61
Col3a1P08121 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms