Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 Mir5106-201ENSMUST00000174936 73 ntBASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 Gm28614-201ENSMUST00000186483 458 ntBASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 Gm28923-201ENSMUST00000187755 322 ntBASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 Gm37355-201ENSMUST00000193345 606 ntBASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 Gm44879-201ENSMUST00000207007 503 ntBASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 Gm45727-201ENSMUST00000212886 572 ntBASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 AC156504.1-201ENSMUST00000214608 157 ntBASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 Gm3213-201ENSMUST00000219296 441 ntBASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 Gm31931-201ENSMUST00000219666 222 ntBASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 AC174776.1-201ENSMUST00000221509 405 ntBASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 AC174776.2-201ENSMUST00000222561 405 ntBASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 Gm7093-201ENSMUST00000223004 581 ntBASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 AC154738.5-201ENSMUST00000227397 310 ntBASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 Gm13712-201ENSMUST00000117484 2295 ntBASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
Smarcb1Q9Z0H3 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 Mir551b-201ENSMUST00000102165 98 ntBASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 Gm26019-201ENSMUST00000104407 119 ntBASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 Gm14791-201ENSMUST00000119061 1166 ntBASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 Gm12978-201ENSMUST00000121250 522 ntBASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 Gm9003-201ENSMUST00000121810 482 ntBASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 Gm22204-201ENSMUST00000122654 327 ntBASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 Gm26036-201ENSMUST00000158149 144 ntBASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 Gm17101-201ENSMUST00000169520 1588 ntBASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 Mir6996-201ENSMUST00000183922 61 ntBASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 Gm27190-201ENSMUST00000184890 542 ntBASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 Gm4854-201ENSMUST00000185902 574 ntBASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 Gm29556-201ENSMUST00000187591 696 ntBASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 Gm42983-201ENSMUST00000199879 815 ntBASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 Gm7468-201ENSMUST00000203900 652 ntBASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 Gm44543-201ENSMUST00000209136 396 ntBASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 Gm45498-201ENSMUST00000210346 283 ntBASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 AC158641.1-201ENSMUST00000218933 229 ntBASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 CT030242.2-201ENSMUST00000221588 148 ntBASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 Gm43374-201ENSMUST00000202498 2391 ntBASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 Gm3972-201ENSMUST00000173960 2861 ntBASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Smarcb1Q9Z0H3 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Smarcb1Q9Z0H3 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.41□□□□□ -1.7
Smarcb1Q9Z0H3 Gm43178-201ENSMUST00000197257 1386 ntBASIC4.41□□□□□ -1.7
Smarcb1Q9Z0H3 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.41□□□□□ -1.7
Smarcb1Q9Z0H3 Gm7195-201ENSMUST00000190869 1707 ntBASIC4.41□□□□□ -1.7
Smarcb1Q9Z0H3 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Smarcb1Q9Z0H3 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Smarcb1Q9Z0H3 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Smarcb1Q9Z0H3 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Smarcb1Q9Z0H3 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Smarcb1Q9Z0H3 Gm12252-201ENSMUST00000119517 219 ntBASIC4.41□□□□□ -1.7
Smarcb1Q9Z0H3 Gm12340-201ENSMUST00000121617 462 ntBASIC4.41□□□□□ -1.7
Smarcb1Q9Z0H3 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC4.41□□□□□ -1.7
Smarcb1Q9Z0H3 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Smarcb1Q9Z0H3 Gm23960-201ENSMUST00000157206 131 ntBASIC4.41□□□□□ -1.7
Smarcb1Q9Z0H3 Gm23499-201ENSMUST00000157736 268 ntBASIC4.41□□□□□ -1.7
Smarcb1Q9Z0H3 Gm26362-201ENSMUST00000158865 315 ntBASIC4.41□□□□□ -1.7
Smarcb1Q9Z0H3 Gm25447-201ENSMUST00000158997 128 ntBASIC4.41□□□□□ -1.7
Smarcb1Q9Z0H3 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Smarcb1Q9Z0H3 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC4.41□□□□□ -1.7
Smarcb1Q9Z0H3 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Smarcb1Q9Z0H3 Gm36994-201ENSMUST00000192941 492 ntBASIC4.41□□□□□ -1.7
Smarcb1Q9Z0H3 Gm43441-201ENSMUST00000201458 205 ntBASIC4.41□□□□□ -1.7
Smarcb1Q9Z0H3 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Smarcb1Q9Z0H3 Gm44765-201ENSMUST00000206927 601 ntBASIC4.41□□□□□ -1.7
Smarcb1Q9Z0H3 Olfr1309-201ENSMUST00000207885 964 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms