Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm29448-201ENSMUST00000186675 615 ntBASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Gm29314-201ENSMUST00000186800 615 ntBASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Gm28253-202ENSMUST00000187971 615 ntBASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Gm29169-201ENSMUST00000189835 615 ntBASIC4.19□□□□□ -1.74
Trim3Q9R1R2 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Gm18100-201ENSMUST00000200897 452 ntBASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Gm44972-201ENSMUST00000206419 406 ntBASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Gm19366-201ENSMUST00000206996 156 ntBASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Gm6230-201ENSMUST00000208077 780 ntBASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Trim3Q9R1R2 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Gm3338-201ENSMUST00000220982 269 ntBASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Trim3Q9R1R2 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Gm43662-201ENSMUST00000198310 2271 ntBASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Gm15333-201ENSMUST00000118825 364 ntBASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Gm14067-201ENSMUST00000119340 314 ntBASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Gm11385-201ENSMUST00000121513 570 ntBASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Gm14977-201ENSMUST00000121626 812 ntBASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Gm11349-201ENSMUST00000122209 1116 ntBASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC4.18□□□□□ -1.74
Trim3Q9R1R2 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Mir7031-201ENSMUST00000183860 65 ntBASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Gm17790-201ENSMUST00000191545 1228 ntBASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Gm37684-201ENSMUST00000192779 355 ntBASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Gm38334-201ENSMUST00000195060 313 ntBASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Gm38221-201ENSMUST00000195146 365 ntBASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Gm45689-201ENSMUST00000210522 133 ntBASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Gm8106-201ENSMUST00000213123 523 ntBASIC4.18□□□□□ -1.74
Trim3Q9R1R2 AC174776.1-201ENSMUST00000221509 405 ntBASIC4.18□□□□□ -1.74
Trim3Q9R1R2 AC164424.1-201ENSMUST00000221690 170 ntBASIC4.18□□□□□ -1.74
Trim3Q9R1R2 AC174776.2-201ENSMUST00000222561 405 ntBASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Gm40598-201ENSMUST00000222953 547 ntBASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Gm25005-201ENSMUST00000083812 156 ntBASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Trim3Q9R1R2 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Trim3Q9R1R2 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Gm45160-201ENSMUST00000207112 3099 ntBASIC4.18□□□□□ -1.74
Trim3Q9R1R2 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Gm44567-201ENSMUST00000205645 2631 ntBASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Gm4596-201ENSMUST00000117197 442 ntBASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Gm15426-201ENSMUST00000117823 556 ntBASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Gm14840-201ENSMUST00000122135 594 ntBASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Gm6969-201ENSMUST00000140065 342 ntBASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Gm23906-201ENSMUST00000157573 128 ntBASIC4.17□□□□□ -1.74
Trim3Q9R1R2 Gm23781-201ENSMUST00000157940 308 ntBASIC4.17□□□□□ -1.74
Trim3Q9R1R2 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms