Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm37492-201ENSMUST00000191948 376 ntBASIC5.76□□□□□ -1.49
Trim39Q9ESN2 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC5.76□□□□□ -1.49
Trim39Q9ESN2 AC122844.1-201ENSMUST00000195971 107 ntBASIC5.76□□□□□ -1.49
Trim39Q9ESN2 Mir466e-201ENSMUST00000198862 84 ntBASIC5.76□□□□□ -1.49
Trim39Q9ESN2 Gm2287-202ENSMUST00000199619 1000 ntBASIC5.76□□□□□ -1.49
Trim39Q9ESN2 Mir466c-1-201ENSMUST00000200654 84 ntBASIC5.76□□□□□ -1.49
Trim39Q9ESN2 Gm45722-201ENSMUST00000213075 466 ntBASIC5.76□□□□□ -1.49
Trim39Q9ESN2 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC5.76□□□□□ -1.49
Trim39Q9ESN2 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC5.76□□□□□ -1.49
Trim39Q9ESN2 Gm20102-201ENSMUST00000222445 220 ntBASIC5.76□□□□□ -1.49
Trim39Q9ESN2 Gm18247-201ENSMUST00000222937 601 ntBASIC5.76□□□□□ -1.49
Trim39Q9ESN2 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim39Q9ESN2 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Trim39Q9ESN2 Gm25853-201ENSMUST00000082793 132 ntBASIC5.76□□□□□ -1.49
Trim39Q9ESN2 Gm29486-201ENSMUST00000088648 372 ntBASIC5.76□□□□□ -1.49
Trim39Q9ESN2 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Trim39Q9ESN2 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim39Q9ESN2 AC151831.1-201ENSMUST00000227609 4033 ntBASIC5.76□□□□□ -1.49
Trim39Q9ESN2 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim39Q9ESN2 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Trim39Q9ESN2 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim39Q9ESN2 Gm29084-201ENSMUST00000185587 1452 ntBASIC5.76□□□□□ -1.49
Trim39Q9ESN2 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.76□□□□□ -1.49
Trim39Q9ESN2 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC5.76□□□□□ -1.49
Trim39Q9ESN2 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Trim39Q9ESN2 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Gm11577-201ENSMUST00000118030 737 ntBASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Gm14771-201ENSMUST00000118249 203 ntBASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Gm11920-201ENSMUST00000118491 563 ntBASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Gm13510-201ENSMUST00000118659 429 ntBASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Gm9294-201ENSMUST00000165198 789 ntBASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Gm7925-201ENSMUST00000166690 401 ntBASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Gm4557-201ENSMUST00000185826 907 ntBASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Gm4526-201ENSMUST00000186039 920 ntBASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Gm8708-201ENSMUST00000188500 906 ntBASIC5.75□□□□□ -1.49
Trim39Q9ESN2 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Gm37103-201ENSMUST00000191830 115 ntBASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Gm37495-201ENSMUST00000194590 264 ntBASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Gm44361-201ENSMUST00000197960 94 ntBASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Gm44274-201ENSMUST00000203417 256 ntBASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 AC153506.2-201ENSMUST00000218051 257 ntBASIC5.75□□□□□ -1.49
Trim39Q9ESN2 AC159380.1-201ENSMUST00000218096 121 ntBASIC5.75□□□□□ -1.49
Trim39Q9ESN2 CT010455.1-201ENSMUST00000218579 413 ntBASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 AC139197.1-201ENSMUST00000228332 813 ntBASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Gm22508-201ENSMUST00000082772 110 ntBASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 AC174459.1-201ENSMUST00000224476 1943 ntBASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Trim39Q9ESN2 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.75□□□□□ -1.49
Trim39Q9ESN2 AC163731.1-201ENSMUST00000225696 3118 ntBASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Gm7195-201ENSMUST00000190869 1707 ntBASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Gm44193-201ENSMUST00000204822 2523 ntBASIC5.74□□□□□ -1.49
Trim39Q9ESN2 Gm44078-201ENSMUST00000204652 2646 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 128.3 ms