Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm25278-201ENSMUST00000157267 120 ntBASIC4.09□□□□□ -1.75
Lima1Q9ERG0 Gm23501-201ENSMUST00000157744 256 ntBASIC4.09□□□□□ -1.75
Lima1Q9ERG0 Gm26085-201ENSMUST00000157900 116 ntBASIC4.09□□□□□ -1.75
Lima1Q9ERG0 Gm25264-201ENSMUST00000158519 117 ntBASIC4.09□□□□□ -1.75
Lima1Q9ERG0 Gm4842-201ENSMUST00000183237 835 ntBASIC4.09□□□□□ -1.75
Lima1Q9ERG0 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Lima1Q9ERG0 Gm37167-201ENSMUST00000194946 396 ntBASIC4.09□□□□□ -1.75
Lima1Q9ERG0 Gm43710-201ENSMUST00000199583 452 ntBASIC4.09□□□□□ -1.75
Lima1Q9ERG0 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC4.09□□□□□ -1.75
Lima1Q9ERG0 Gm20586-201ENSMUST00000210122 547 ntBASIC4.09□□□□□ -1.75
Lima1Q9ERG0 AC160134.1-201ENSMUST00000213450 551 ntBASIC4.09□□□□□ -1.75
Lima1Q9ERG0 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.09□□□□□ -1.75
Lima1Q9ERG0 Gm6776-201ENSMUST00000057752 900 ntBASIC4.09□□□□□ -1.75
Lima1Q9ERG0 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Lima1Q9ERG0 Gm23875-201ENSMUST00000083711 318 ntBASIC4.09□□□□□ -1.75
Lima1Q9ERG0 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Lima1Q9ERG0 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Lima1Q9ERG0 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.09□□□□□ -1.75
Lima1Q9ERG0 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Lima1Q9ERG0 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
Lima1Q9ERG0 AC153522.2-201ENSMUST00000218389 3853 ntBASIC4.09□□□□□ -1.76
Lima1Q9ERG0 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.76
Lima1Q9ERG0 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
Lima1Q9ERG0 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Lima1Q9ERG0 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Lima1Q9ERG0 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Lima1Q9ERG0 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Lima1Q9ERG0 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Lima1Q9ERG0 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Lima1Q9ERG0 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC4.08□□□□□ -1.76
Lima1Q9ERG0 Gm15560-201ENSMUST00000117107 643 ntBASIC4.08□□□□□ -1.76
Lima1Q9ERG0 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC4.08□□□□□ -1.76
Lima1Q9ERG0 Gm12852-201ENSMUST00000119478 719 ntBASIC4.08□□□□□ -1.76
Lima1Q9ERG0 Gm16060-201ENSMUST00000153140 478 ntBASIC4.08□□□□□ -1.76
Lima1Q9ERG0 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC4.08□□□□□ -1.76
Lima1Q9ERG0 Gm25669-201ENSMUST00000157699 112 ntBASIC4.08□□□□□ -1.76
Lima1Q9ERG0 Gm22312-201ENSMUST00000158005 130 ntBASIC4.08□□□□□ -1.76
Lima1Q9ERG0 Gm22156-201ENSMUST00000158409 141 ntBASIC4.08□□□□□ -1.76
Lima1Q9ERG0 Gm18560-201ENSMUST00000173463 1123 ntBASIC4.08□□□□□ -1.76
Lima1Q9ERG0 Gm27805-201ENSMUST00000184513 79 ntBASIC4.08□□□□□ -1.76
Lima1Q9ERG0 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC4.08□□□□□ -1.76
Lima1Q9ERG0 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC4.08□□□□□ -1.76
Lima1Q9ERG0 Gm38080-201ENSMUST00000194035 268 ntBASIC4.08□□□□□ -1.76
Lima1Q9ERG0 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC4.08□□□□□ -1.76
Lima1Q9ERG0 Gm18452-201ENSMUST00000202968 1111 ntBASIC4.08□□□□□ -1.76
Lima1Q9ERG0 Gm18791-201ENSMUST00000204611 726 ntBASIC4.08□□□□□ -1.76
Lima1Q9ERG0 Gm8132-201ENSMUST00000204938 640 ntBASIC4.08□□□□□ -1.76
Lima1Q9ERG0 Gm44259-201ENSMUST00000204996 298 ntBASIC4.08□□□□□ -1.76
Lima1Q9ERG0 Gm6303-201ENSMUST00000210123 471 ntBASIC4.08□□□□□ -1.76
Lima1Q9ERG0 AC153526.4-201ENSMUST00000217713 379 ntBASIC4.08□□□□□ -1.76
Lima1Q9ERG0 AC079644.1-201ENSMUST00000220586 405 ntBASIC4.08□□□□□ -1.76
Lima1Q9ERG0 Gm46996-201ENSMUST00000220924 408 ntBASIC4.08□□□□□ -1.76
Lima1Q9ERG0 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Lima1Q9ERG0 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Lima1Q9ERG0 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Lima1Q9ERG0 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Lima1Q9ERG0 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Lima1Q9ERG0 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Lima1Q9ERG0 n-R5s162-201ENSMUST00000082581 119 ntBASIC4.08□□□□□ -1.76
Lima1Q9ERG0 Gm23464-201ENSMUST00000083145 147 ntBASIC4.08□□□□□ -1.76
Lima1Q9ERG0 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Lima1Q9ERG0 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Lima1Q9ERG0 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Gm43882-201ENSMUST00000204871 2264 ntBASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Gm28240-201ENSMUST00000187560 2053 ntBASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Gm8744-201ENSMUST00000204475 3581 ntBASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Gm17101-201ENSMUST00000169520 1588 ntBASIC4.07□□□□□ -1.76
Lima1Q9ERG0 AC126673.1-201ENSMUST00000223208 3856 ntBASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Lima1Q9ERG0 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Gm22194-201ENSMUST00000116869 95 ntBASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Gm15180-201ENSMUST00000117745 492 ntBASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Gm13550-201ENSMUST00000118185 525 ntBASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Gm13170-201ENSMUST00000119716 643 ntBASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Gm15926-201ENSMUST00000120492 550 ntBASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Lima1Q9ERG0 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Gm23465-201ENSMUST00000157134 262 ntBASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Gm23781-201ENSMUST00000157940 308 ntBASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Gm26352-201ENSMUST00000158223 125 ntBASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Mir6938-201ENSMUST00000184173 63 ntBASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Gm8480-201ENSMUST00000190350 698 ntBASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Lima1Q9ERG0 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC4.07□□□□□ -1.76
Lima1Q9ERG0 AC105407.3-201ENSMUST00000224161 648 ntBASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Lima1Q9ERG0 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC4.07□□□□□ -1.76
Lima1Q9ERG0 Snord14e-201ENSMUST00000082857 90 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 108.2 ms