Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Ddx56Q9D0R4 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ddx56Q9D0R4 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ddx56Q9D0R4 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Ddx56Q9D0R4 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Ddx56Q9D0R4 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Ddx56Q9D0R4 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Gm42483-201ENSMUST00000197556 1742 ntBASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Gm15659-201ENSMUST00000118881 341 ntBASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Gm13557-201ENSMUST00000120771 382 ntBASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Gm11404-201ENSMUST00000120872 494 ntBASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Gm22208-201ENSMUST00000122658 110 ntBASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Gm16331-201ENSMUST00000144274 498 ntBASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Gm25342-201ENSMUST00000157459 122 ntBASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Gm24216-201ENSMUST00000158259 117 ntBASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Gm2389-201ENSMUST00000160487 189 ntBASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Gm6632-201ENSMUST00000168425 954 ntBASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Gm20401-201ENSMUST00000173717 212 ntBASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Gm27688-201ENSMUST00000183634 91 ntBASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Gm19231-201ENSMUST00000193212 830 ntBASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Gm33952-201ENSMUST00000197795 408 ntBASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Gm42542-201ENSMUST00000197978 268 ntBASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 AC156795.1-201ENSMUST00000214655 414 ntBASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 AC164315.1-201ENSMUST00000226452 708 ntBASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Rybp-ps-201ENSMUST00000069489 681 ntBASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Gm10115-201ENSMUST00000076071 1228 ntBASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Gm43696-201ENSMUST00000199385 6071 ntBASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ddx56Q9D0R4 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 Gm24429-201ENSMUST00000104076 132 ntBASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 Mir292-201ENSMUST00000104847 82 ntBASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 Gm14086-201ENSMUST00000117152 173 ntBASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 Gm11488-201ENSMUST00000117277 863 ntBASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 Gm13503-201ENSMUST00000119017 446 ntBASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 Gm25555-201ENSMUST00000158078 111 ntBASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 Gm18417-201ENSMUST00000176564 648 ntBASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 Mir6921-201ENSMUST00000183719 80 ntBASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 Mir7687-201ENSMUST00000184722 59 ntBASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 Gm28429-201ENSMUST00000188521 363 ntBASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 AC154552.5-201ENSMUST00000222352 207 ntBASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 Gm24763-201ENSMUST00000083688 190 ntBASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.45□□□□□ -1.54
Ddx56Q9D0R4 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms