Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm7984-201ENSMUST00000060640 538 ntBASIC5.48□□□□□ -1.53
Nkx6-1Q99MA9 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Nkx6-1Q99MA9 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Nkx6-1Q99MA9 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Nkx6-1Q99MA9 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Nkx6-1Q99MA9 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Nkx6-1Q99MA9 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Nkx6-1Q99MA9 AC159006.2-201ENSMUST00000228734 4144 ntBASIC5.48□□□□□ -1.53
Nkx6-1Q99MA9 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Nkx6-1Q99MA9 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Nkx6-1Q99MA9 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Nkx6-1Q99MA9 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Nkx6-1Q99MA9 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Nkx6-1Q99MA9 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Nkx6-1Q99MA9 Gm43443-201ENSMUST00000202337 2393 ntBASIC5.48□□□□□ -1.53
Nkx6-1Q99MA9 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Nkx6-1Q99MA9 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Nkx6-1Q99MA9 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Nkx6-1Q99MA9 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Nkx6-1Q99MA9 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm44587-201ENSMUST00000207399 1685 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm37775-201ENSMUST00000194120 2313 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm38307-201ENSMUST00000195630 1840 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm42955-201ENSMUST00000197355 3393 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm23424-201ENSMUST00000103889 110 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm25563-201ENSMUST00000104603 74 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm12115-201ENSMUST00000119969 447 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm12543-201ENSMUST00000120410 543 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm12578-201ENSMUST00000121244 417 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm12322-201ENSMUST00000121605 389 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm22235-201ENSMUST00000157085 110 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm23553-201ENSMUST00000157817 295 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm23774-201ENSMUST00000158990 131 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm9294-201ENSMUST00000165198 789 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm17086-201ENSMUST00000171346 484 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm25397-201ENSMUST00000176951 92 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm22584-201ENSMUST00000177935 92 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm25670-201ENSMUST00000178423 107 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm26239-201ENSMUST00000178842 107 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm24267-201ENSMUST00000179841 107 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm26731-201ENSMUST00000180683 543 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm5116-201ENSMUST00000187732 463 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm29627-201ENSMUST00000187984 463 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm43494-201ENSMUST00000197672 388 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm45628-201ENSMUST00000210849 274 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm17890-201ENSMUST00000221419 757 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 AC154636.1-201ENSMUST00000223226 126 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 CT025157.1-201ENSMUST00000226241 292 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 AC154846.2-201ENSMUST00000228805 424 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm24292-201ENSMUST00000082888 107 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Mir31-201ENSMUST00000083474 106 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Mir30b-201ENSMUST00000083542 96 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm25512-201ENSMUST00000083863 107 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm42537-201ENSMUST00000198260 2574 ntBASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Nkx6-1Q99MA9 Gm37076-201ENSMUST00000192033 2294 ntBASIC5.46□□□□□ -1.53
Nkx6-1Q99MA9 Gm29084-201ENSMUST00000185587 1452 ntBASIC5.46□□□□□ -1.53
Nkx6-1Q99MA9 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
Nkx6-1Q99MA9 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC5.46□□□□□ -1.53
Nkx6-1Q99MA9 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Nkx6-1Q99MA9 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC5.46□□□□□ -1.54
Nkx6-1Q99MA9 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Nkx6-1Q99MA9 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms