Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm11631-201ENSMUST00000119220 156 ntBASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Gm14238-201ENSMUST00000120227 323 ntBASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Gm13720-201ENSMUST00000120741 196 ntBASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Gm16458-201ENSMUST00000121428 502 ntBASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Gm25052-201ENSMUST00000122661 158 ntBASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Gm23069-201ENSMUST00000158240 311 ntBASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Mir6971-201ENSMUST00000183497 63 ntBASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Gm37946-201ENSMUST00000192064 347 ntBASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Gm31123-201ENSMUST00000192094 666 ntBASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Gm37979-201ENSMUST00000193065 712 ntBASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Gm38253-201ENSMUST00000194058 4678 ntBASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Gm42720-201ENSMUST00000196813 300 ntBASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Gm42958-201ENSMUST00000197595 318 ntBASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Gm43198-201ENSMUST00000200927 326 ntBASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Gm43418-201ENSMUST00000201334 428 ntBASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Gm9655-201ENSMUST00000211321 1284 ntBASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 AC157654.1-201ENSMUST00000224130 820 ntBASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 AC154245.1-201ENSMUST00000224615 601 ntBASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Gm24150-201ENSMUST00000082759 104 ntBASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Gm23796-201ENSMUST00000084011 160 ntBASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Gm43266-201ENSMUST00000201049 1771 ntBASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Gm35755-201ENSMUST00000222392 2077 ntBASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Pcdha9Q91Y11 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 Gm37174-201ENSMUST00000194699 3058 ntBASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 Gm12820-201ENSMUST00000119233 342 ntBASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 Gm24931-201ENSMUST00000158324 107 ntBASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 Gm26915-201ENSMUST00000183080 748 ntBASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 Mir6238-201ENSMUST00000184140 129 ntBASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 Gm27551-201ENSMUST00000184258 77 ntBASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 Gm10292-202ENSMUST00000193165 585 ntBASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 Gm6261-201ENSMUST00000204707 760 ntBASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 Gm6171-201ENSMUST00000220760 645 ntBASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 Gm17791-201ENSMUST00000185660 1501 ntBASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Pcdha9Q91Y11 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Pcdha9Q91Y11 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Pcdha9Q91Y11 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Pcdha9Q91Y11 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.26□□□□□ -1.57
Pcdha9Q91Y11 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Pcdha9Q91Y11 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Pcdha9Q91Y11 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 117.1 ms