Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ndc1Q8VCB1 AC122769.3-201ENSMUST00000227739 3245 ntBASIC5.23□□□□□ -1.57
Ndc1Q8VCB1 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ndc1Q8VCB1 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Ndc1Q8VCB1 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ndc1Q8VCB1 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Ndc1Q8VCB1 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Ndc1Q8VCB1 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Gm24374-201ENSMUST00000104394 106 ntBASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Gm13681-201ENSMUST00000117925 210 ntBASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Gm13755-201ENSMUST00000118509 305 ntBASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Gm12074-201ENSMUST00000120189 219 ntBASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Gm11804-201ENSMUST00000121663 468 ntBASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Gm22452-201ENSMUST00000122804 104 ntBASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Gm27905-201ENSMUST00000184005 207 ntBASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Mir7687-201ENSMUST00000184722 59 ntBASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Gm29105-201ENSMUST00000187256 450 ntBASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Gm28974-201ENSMUST00000187893 231 ntBASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Gm2053-201ENSMUST00000195671 631 ntBASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Gm44465-201ENSMUST00000199536 114 ntBASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Gm6520-201ENSMUST00000200636 410 ntBASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Gm10264-201ENSMUST00000220589 429 ntBASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Gm19441-201ENSMUST00000221545 330 ntBASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 CT030135.1-201ENSMUST00000223760 570 ntBASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 AC161884.2-201ENSMUST00000224513 227 ntBASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 AC133101.1-201ENSMUST00000226939 1199 ntBASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 n-R5s37-201ENSMUST00000082533 118 ntBASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Gm37553-201ENSMUST00000194135 1602 ntBASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Ndc1Q8VCB1 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Ndc1Q8VCB1 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Ndc1Q8VCB1 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Ndc1Q8VCB1 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Ndc1Q8VCB1 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
Ndc1Q8VCB1 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.21□□□□□ -1.58
Ndc1Q8VCB1 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ndc1Q8VCB1 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ndc1Q8VCB1 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ndc1Q8VCB1 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC5.21□□□□□ -1.58
Ndc1Q8VCB1 Gm23750-201ENSMUST00000104222 132 ntBASIC5.21□□□□□ -1.58
Ndc1Q8VCB1 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Ndc1Q8VCB1 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Ndc1Q8VCB1 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.21□□□□□ -1.58
Ndc1Q8VCB1 Gm11970-201ENSMUST00000116105 320 ntBASIC5.21□□□□□ -1.58
Ndc1Q8VCB1 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC5.21□□□□□ -1.58
Ndc1Q8VCB1 Gm14771-201ENSMUST00000118249 203 ntBASIC5.21□□□□□ -1.58
Ndc1Q8VCB1 Gm15400-201ENSMUST00000118944 601 ntBASIC5.21□□□□□ -1.58
Ndc1Q8VCB1 Gm13887-201ENSMUST00000119009 344 ntBASIC5.21□□□□□ -1.58
Ndc1Q8VCB1 Gm12935-201ENSMUST00000119352 246 ntBASIC5.21□□□□□ -1.58
Ndc1Q8VCB1 Gm7079-201ENSMUST00000119726 171 ntBASIC5.21□□□□□ -1.58
Ndc1Q8VCB1 Gm15490-201ENSMUST00000119894 387 ntBASIC5.21□□□□□ -1.58
Ndc1Q8VCB1 Gm11321-201ENSMUST00000121257 902 ntBASIC5.21□□□□□ -1.58
Ndc1Q8VCB1 Gm11254-201ENSMUST00000122368 653 ntBASIC5.21□□□□□ -1.58
Ndc1Q8VCB1 Gm14903-201ENSMUST00000122435 537 ntBASIC5.21□□□□□ -1.58
Ndc1Q8VCB1 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC5.21□□□□□ -1.58
Ndc1Q8VCB1 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC5.21□□□□□ -1.58
Ndc1Q8VCB1 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.21□□□□□ -1.58
Ndc1Q8VCB1 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC5.21□□□□□ -1.58
Ndc1Q8VCB1 Mir3080-201ENSMUST00000175010 79 ntBASIC5.21□□□□□ -1.58
Ndc1Q8VCB1 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC5.21□□□□□ -1.58
Ndc1Q8VCB1 Gm5709-201ENSMUST00000177879 1165 ntBASIC5.21□□□□□ -1.58
Ndc1Q8VCB1 Gm28724-201ENSMUST00000186149 625 ntBASIC5.21□□□□□ -1.58
Ndc1Q8VCB1 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ndc1Q8VCB1 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ndc1Q8VCB1 Gm5001-201ENSMUST00000204361 331 ntBASIC5.21□□□□□ -1.58
Ndc1Q8VCB1 Gm44539-201ENSMUST00000206010 238 ntBASIC5.21□□□□□ -1.58
Ndc1Q8VCB1 Gm17780-201ENSMUST00000207142 612 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms