Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC5.4□□□□□ -1.54
Syne4Q8CII8 Gm11625-201ENSMUST00000119535 296 ntBASIC5.4□□□□□ -1.54
Syne4Q8CII8 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC5.4□□□□□ -1.54
Syne4Q8CII8 Gm13471-201ENSMUST00000122057 433 ntBASIC5.4□□□□□ -1.54
Syne4Q8CII8 Gm23792-201ENSMUST00000122557 93 ntBASIC5.4□□□□□ -1.54
Syne4Q8CII8 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Syne4Q8CII8 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC5.4□□□□□ -1.54
Syne4Q8CII8 Gm22637-201ENSMUST00000158144 283 ntBASIC5.4□□□□□ -1.54
Syne4Q8CII8 Gm24768-201ENSMUST00000158512 94 ntBASIC5.4□□□□□ -1.54
Syne4Q8CII8 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
Syne4Q8CII8 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Syne4Q8CII8 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Syne4Q8CII8 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Syne4Q8CII8 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Syne4Q8CII8 Gm24969-201ENSMUST00000180331 79 ntBASIC5.4□□□□□ -1.54
Syne4Q8CII8 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC5.4□□□□□ -1.54
Syne4Q8CII8 Gm27817-201ENSMUST00000184302 233 ntBASIC5.4□□□□□ -1.54
Syne4Q8CII8 Gm28967-201ENSMUST00000187351 281 ntBASIC5.4□□□□□ -1.54
Syne4Q8CII8 Gm9443-201ENSMUST00000188406 816 ntBASIC5.4□□□□□ -1.54
Syne4Q8CII8 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC5.4□□□□□ -1.54
Syne4Q8CII8 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC5.4□□□□□ -1.54
Syne4Q8CII8 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC5.4□□□□□ -1.54
Syne4Q8CII8 Gm43828-201ENSMUST00000196890 639 ntBASIC5.4□□□□□ -1.54
Syne4Q8CII8 Gm43104-201ENSMUST00000197234 311 ntBASIC5.4□□□□□ -1.54
Syne4Q8CII8 Gm43228-201ENSMUST00000200735 264 ntBASIC5.4□□□□□ -1.54
Syne4Q8CII8 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC5.4□□□□□ -1.54
Syne4Q8CII8 Gm8556-201ENSMUST00000210437 664 ntBASIC5.4□□□□□ -1.54
Syne4Q8CII8 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC5.4□□□□□ -1.54
Syne4Q8CII8 AC166263.1-201ENSMUST00000218586 238 ntBASIC5.4□□□□□ -1.54
Syne4Q8CII8 Gm9973-202ENSMUST00000220926 166 ntBASIC5.4□□□□□ -1.54
Syne4Q8CII8 Gm32300-201ENSMUST00000221735 515 ntBASIC5.4□□□□□ -1.54
Syne4Q8CII8 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Syne4Q8CII8 Gm23300-201ENSMUST00000082712 125 ntBASIC5.4□□□□□ -1.54
Syne4Q8CII8 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Syne4Q8CII8 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Syne4Q8CII8 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Syne4Q8CII8 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC5.4□□□□□ -1.55
Syne4Q8CII8 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.4□□□□□ -1.55
Syne4Q8CII8 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
Syne4Q8CII8 Gm45853-201ENSMUST00000212310 3171 ntBASIC5.4□□□□□ -1.55
Syne4Q8CII8 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Syne4Q8CII8 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.4□□□□□ -1.55
Syne4Q8CII8 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC5.4□□□□□ -1.55
Syne4Q8CII8 Gm37504-201ENSMUST00000192537 2374 ntBASIC5.4□□□□□ -1.55
Syne4Q8CII8 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Syne4Q8CII8 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.39□□□□□ -1.55
Syne4Q8CII8 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.39□□□□□ -1.55
Syne4Q8CII8 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.39□□□□□ -1.55
Syne4Q8CII8 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Syne4Q8CII8 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
Syne4Q8CII8 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Syne4Q8CII8 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.39□□□□□ -1.55
Syne4Q8CII8 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.39□□□□□ -1.55
Syne4Q8CII8 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Syne4Q8CII8 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Syne4Q8CII8 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Syne4Q8CII8 Mir669p-2-201ENSMUST00000103868 87 ntBASIC5.39□□□□□ -1.55
Syne4Q8CII8 Mir669p-1-201ENSMUST00000103884 87 ntBASIC5.39□□□□□ -1.55
Syne4Q8CII8 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
Syne4Q8CII8 Zfp389-201ENSMUST00000118425 675 ntBASIC5.39□□□□□ -1.55
Syne4Q8CII8 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC5.39□□□□□ -1.55
Syne4Q8CII8 Gm11890-201ENSMUST00000119585 417 ntBASIC5.39□□□□□ -1.55
Syne4Q8CII8 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC5.39□□□□□ -1.55
Syne4Q8CII8 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC5.39□□□□□ -1.55
Syne4Q8CII8 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC5.39□□□□□ -1.55
Syne4Q8CII8 Gm24371-201ENSMUST00000122662 267 ntBASIC5.39□□□□□ -1.55
Syne4Q8CII8 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Syne4Q8CII8 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC5.39□□□□□ -1.55
Syne4Q8CII8 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC5.39□□□□□ -1.55
Syne4Q8CII8 Gm24774-201ENSMUST00000157384 134 ntBASIC5.39□□□□□ -1.55
Syne4Q8CII8 Gm24745-201ENSMUST00000157840 85 ntBASIC5.39□□□□□ -1.55
Syne4Q8CII8 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC5.39□□□□□ -1.55
Syne4Q8CII8 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC5.39□□□□□ -1.55
Syne4Q8CII8 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC5.39□□□□□ -1.55
Syne4Q8CII8 Gm17956-201ENSMUST00000199931 838 ntBASIC5.39□□□□□ -1.55
Syne4Q8CII8 Gm18861-201ENSMUST00000202509 1186 ntBASIC5.39□□□□□ -1.55
Syne4Q8CII8 Gm36247-201ENSMUST00000211834 285 ntBASIC5.39□□□□□ -1.55
Syne4Q8CII8 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Syne4Q8CII8 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Syne4Q8CII8 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Syne4Q8CII8 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Syne4Q8CII8 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Syne4Q8CII8 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Syne4Q8CII8 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Syne4Q8CII8 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Syne4Q8CII8 Synpr-207ENSMUST00000223583 3362 ntBASIC5.39□□□□□ -1.55
Syne4Q8CII8 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Syne4Q8CII8 Gm44567-201ENSMUST00000205645 2631 ntBASIC5.39□□□□□ -1.55
Syne4Q8CII8 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC5.39□□□□□ -1.55
Syne4Q8CII8 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Syne4Q8CII8 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Syne4Q8CII8 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Syne4Q8CII8 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Syne4Q8CII8 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Syne4Q8CII8 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.38□□□□□ -1.55
Syne4Q8CII8 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Syne4Q8CII8 Gm11506-201ENSMUST00000122414 470 ntBASIC5.38□□□□□ -1.55
Syne4Q8CII8 Gm22204-201ENSMUST00000122654 327 ntBASIC5.38□□□□□ -1.55
Syne4Q8CII8 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC5.38□□□□□ -1.55
Syne4Q8CII8 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms