Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Col6a6Q8C6K9 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Col6a6Q8C6K9 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Col6a6Q8C6K9 Gm20667-201ENSMUST00000175674 1930 ntBASIC3.62□□□□□ -1.83
Col6a6Q8C6K9 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC3.62□□□□□ -1.83
Col6a6Q8C6K9 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Col6a6Q8C6K9 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
Col6a6Q8C6K9 Gm10241-201ENSMUST00000117664 286 ntBASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Gm13690-201ENSMUST00000118989 285 ntBASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Gm6031-201ENSMUST00000121314 1054 ntBASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Gm4479-201ENSMUST00000178807 171 ntBASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Gm17781-201ENSMUST00000195232 649 ntBASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Gm44099-201ENSMUST00000203299 112 ntBASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Gm44118-201ENSMUST00000204665 229 ntBASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Gm7639-201ENSMUST00000212608 484 ntBASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Gm18903-201ENSMUST00000215343 480 ntBASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 AC144798.1-201ENSMUST00000228120 391 ntBASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Gm37639-201ENSMUST00000191623 2785 ntBASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Mir292-201ENSMUST00000104847 82 ntBASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Gm10936-201ENSMUST00000105264 252 ntBASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Gm9043-201ENSMUST00000119677 314 ntBASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Gm25105-201ENSMUST00000122477 130 ntBASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Gm25438-201ENSMUST00000158281 110 ntBASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Gm28390-201ENSMUST00000185212 700 ntBASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Gm44513-201ENSMUST00000206811 439 ntBASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Gm8231-201ENSMUST00000221617 783 ntBASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 AC130547.1-201ENSMUST00000228079 1047 ntBASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 AC154323.3-201ENSMUST00000226927 1660 ntBASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Gm43211-201ENSMUST00000196901 1899 ntBASIC3.61□□□□□ -1.83
Col6a6Q8C6K9 Gm37140-201ENSMUST00000192914 1684 ntBASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 Gm37718-201ENSMUST00000191655 2631 ntBASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 Gm25376-201ENSMUST00000104340 133 ntBASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 Gm11719-201ENSMUST00000119399 351 ntBASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 Gm22156-201ENSMUST00000158409 141 ntBASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 Gm25369-201ENSMUST00000158848 132 ntBASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 Gm10067-201ENSMUST00000179462 348 ntBASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 AC133517.1-202ENSMUST00000224409 233 ntBASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 AC166095.1-203ENSMUST00000224591 233 ntBASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 Gm10237-201ENSMUST00000078393 273 ntBASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 Gm45137-201ENSMUST00000208652 4415 ntBASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 Gm25727-201ENSMUST00000104522 131 ntBASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 Gm38279-201ENSMUST00000194067 1131 ntBASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 Gm23510-201ENSMUST00000083083 163 ntBASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 Gm43605-201ENSMUST00000199663 3426 ntBASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 Fus-202ENSMUST00000079045 2623 ntBASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Col6a6Q8C6K9 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Col6a6Q8C6K9 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Col6a6Q8C6K9 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Col6a6Q8C6K9 Zfp389-201ENSMUST00000118425 675 ntBASIC3.59□□□□□ -1.83
Col6a6Q8C6K9 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC3.59□□□□□ -1.83
Col6a6Q8C6K9 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.59□□□□□ -1.83
Col6a6Q8C6K9 Gm22857-201ENSMUST00000174969 134 ntBASIC3.59□□□□□ -1.83
Col6a6Q8C6K9 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms