Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Gm14970-201ENSMUST00000122289 355 ntBASIC6.67□□□□□ -1.34
Trim47Q8C0E3 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Gm23016-201ENSMUST00000158431 62 ntBASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Gm22136-201ENSMUST00000158751 268 ntBASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Gm24735-201ENSMUST00000158859 118 ntBASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Gm3084-201ENSMUST00000169967 598 ntBASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Gm27037-201ENSMUST00000182270 960 ntBASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Gm44475-201ENSMUST00000204041 424 ntBASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Gm21112-201ENSMUST00000212224 578 ntBASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Gm45735-201ENSMUST00000212779 319 ntBASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim47Q8C0E3 AC163033.1-201ENSMUST00000218608 157 ntBASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim47Q8C0E3 AC158388.2-201ENSMUST00000223665 1314 ntBASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC6.67□□□□□ -1.34
Trim47Q8C0E3 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Trim47Q8C0E3 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Gm43900-201ENSMUST00000204868 2669 ntBASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Trim47Q8C0E3 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Mir466h-201ENSMUST00000104748 81 ntBASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Gm11403-201ENSMUST00000122195 369 ntBASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Gm22482-201ENSMUST00000122563 359 ntBASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Snora47-201ENSMUST00000157483 138 ntBASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Gm23581-201ENSMUST00000158531 63 ntBASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Gm17081-201ENSMUST00000167363 478 ntBASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Gm24103-201ENSMUST00000174930 77 ntBASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Mir7220-201ENSMUST00000183978 60 ntBASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Gm18551-201ENSMUST00000195594 642 ntBASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Gm43157-201ENSMUST00000198223 412 ntBASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Gm19900-201ENSMUST00000207285 576 ntBASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Gm6009-201ENSMUST00000210848 280 ntBASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC6.66□□□□□ -1.34
Trim47Q8C0E3 AC091783.2-201ENSMUST00000224626 740 ntBASIC6.66□□□□□ -1.34
Trim47Q8C0E3 AC115289.1-201ENSMUST00000224915 522 ntBASIC6.66□□□□□ -1.34
Trim47Q8C0E3 AC154595.2-201ENSMUST00000225067 310 ntBASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Gm10088-201ENSMUST00000074116 423 ntBASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Gm24446-201ENSMUST00000083982 156 ntBASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Trim47Q8C0E3 CT030159.1-201ENSMUST00000221580 2261 ntBASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Gm5512-201ENSMUST00000218013 1353 ntBASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC6.66□□□□□ -1.34
Trim47Q8C0E3 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
Trim47Q8C0E3 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Gm14245-201ENSMUST00000118939 1843 ntBASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Gm12782-201ENSMUST00000117519 727 ntBASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Gm13469-201ENSMUST00000118231 350 ntBASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Gm14930-201ENSMUST00000118864 652 ntBASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Gm14655-201ENSMUST00000120124 578 ntBASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Gm13493-201ENSMUST00000120318 493 ntBASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Gm13531-201ENSMUST00000121893 543 ntBASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC6.65□□□□□ -1.34
Trim47Q8C0E3 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Ear-ps8-201ENSMUST00000161935 354 ntBASIC6.65□□□□□ -1.34
Trim47Q8C0E3 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC6.65□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms