Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm37097-201ENSMUST00000193676 336 ntBASIC5.66□□□□□ -1.5
Usp47Q8BY87 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC5.66□□□□□ -1.5
Usp47Q8BY87 Gm45796-201ENSMUST00000212483 114 ntBASIC5.66□□□□□ -1.5
Usp47Q8BY87 Gm46138-201ENSMUST00000215294 426 ntBASIC5.66□□□□□ -1.5
Usp47Q8BY87 AC119573.1-201ENSMUST00000227960 757 ntBASIC5.66□□□□□ -1.5
Usp47Q8BY87 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Usp47Q8BY87 Mir193a-201ENSMUST00000083461 66 ntBASIC5.66□□□□□ -1.5
Usp47Q8BY87 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Usp47Q8BY87 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Usp47Q8BY87 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Usp47Q8BY87 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Usp47Q8BY87 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC5.65□□□□□ -1.5
Usp47Q8BY87 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
Usp47Q8BY87 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC5.65□□□□□ -1.5
Usp47Q8BY87 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC5.65□□□□□ -1.5
Usp47Q8BY87 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.65□□□□□ -1.5
Usp47Q8BY87 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Usp47Q8BY87 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Usp47Q8BY87 Gm11406-201ENSMUST00000117418 484 ntBASIC5.65□□□□□ -1.51
Usp47Q8BY87 Gm11761-201ENSMUST00000121392 445 ntBASIC5.65□□□□□ -1.51
Usp47Q8BY87 Gm6650-201ENSMUST00000166710 614 ntBASIC5.65□□□□□ -1.51
Usp47Q8BY87 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC5.65□□□□□ -1.51
Usp47Q8BY87 Gm4248-201ENSMUST00000196905 316 ntBASIC5.65□□□□□ -1.51
Usp47Q8BY87 n-TSaga9-201ENSMUST00000197675 107 ntBASIC5.65□□□□□ -1.51
Usp47Q8BY87 Gm42453-201ENSMUST00000200477 409 ntBASIC5.65□□□□□ -1.51
Usp47Q8BY87 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC5.65□□□□□ -1.51
Usp47Q8BY87 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC5.65□□□□□ -1.51
Usp47Q8BY87 AC154634.3-201ENSMUST00000224589 736 ntBASIC5.65□□□□□ -1.51
Usp47Q8BY87 AC154618.1-201ENSMUST00000227451 303 ntBASIC5.65□□□□□ -1.51
Usp47Q8BY87 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Usp47Q8BY87 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Usp47Q8BY87 Gm37045-201ENSMUST00000192016 2463 ntBASIC5.65□□□□□ -1.51
Usp47Q8BY87 AC192333.5-201ENSMUST00000224620 2350 ntBASIC5.65□□□□□ -1.51
Usp47Q8BY87 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Usp47Q8BY87 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Usp47Q8BY87 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Usp47Q8BY87 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Usp47Q8BY87 AC123858.1-201ENSMUST00000226948 1874 ntBASIC5.64□□□□□ -1.51
Usp47Q8BY87 Gm43872-201ENSMUST00000203218 2213 ntBASIC5.64□□□□□ -1.51
Usp47Q8BY87 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC5.64□□□□□ -1.51
Usp47Q8BY87 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Usp47Q8BY87 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Usp47Q8BY87 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Usp47Q8BY87 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Usp47Q8BY87 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Usp47Q8BY87 Gm43319-201ENSMUST00000198036 2270 ntBASIC5.64□□□□□ -1.51
Usp47Q8BY87 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Usp47Q8BY87 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Usp47Q8BY87 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC5.64□□□□□ -1.51
Usp47Q8BY87 Gm23365-201ENSMUST00000175019 125 ntBASIC5.64□□□□□ -1.51
Usp47Q8BY87 Gm25960-201ENSMUST00000175110 125 ntBASIC5.64□□□□□ -1.51
Usp47Q8BY87 Gm44453-201ENSMUST00000175161 126 ntBASIC5.64□□□□□ -1.51
Usp47Q8BY87 Gm25195-201ENSMUST00000177656 126 ntBASIC5.64□□□□□ -1.51
Usp47Q8BY87 Gm27773-201ENSMUST00000184087 78 ntBASIC5.64□□□□□ -1.51
Usp47Q8BY87 Gm29563-201ENSMUST00000187249 496 ntBASIC5.64□□□□□ -1.51
Usp47Q8BY87 Scgb2b6-201ENSMUST00000188132 330 ntBASIC5.64□□□□□ -1.51
Usp47Q8BY87 Gm37791-201ENSMUST00000195081 286 ntBASIC5.64□□□□□ -1.51
Usp47Q8BY87 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Usp47Q8BY87 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Usp47Q8BY87 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.64□□□□□ -1.51
Usp47Q8BY87 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Usp47Q8BY87 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Usp47Q8BY87 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Usp47Q8BY87 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC5.63□□□□□ -1.51
Usp47Q8BY87 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Usp47Q8BY87 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Usp47Q8BY87 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Usp47Q8BY87 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
Usp47Q8BY87 Gm5248-201ENSMUST00000186108 4046 ntBASIC5.63□□□□□ -1.51
Usp47Q8BY87 AC167420.1-201ENSMUST00000222999 2121 ntBASIC5.63□□□□□ -1.51
Usp47Q8BY87 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Usp47Q8BY87 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
Usp47Q8BY87 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC5.63□□□□□ -1.51
Usp47Q8BY87 Gm15212-201ENSMUST00000122403 466 ntBASIC5.63□□□□□ -1.51
Usp47Q8BY87 Gm24441-201ENSMUST00000157235 281 ntBASIC5.63□□□□□ -1.51
Usp47Q8BY87 Gm23782-201ENSMUST00000157939 120 ntBASIC5.63□□□□□ -1.51
Usp47Q8BY87 Gm25817-201ENSMUST00000177758 121 ntBASIC5.63□□□□□ -1.51
Usp47Q8BY87 Gm24766-201ENSMUST00000179182 121 ntBASIC5.63□□□□□ -1.51
Usp47Q8BY87 Gm19214-201ENSMUST00000191956 1083 ntBASIC5.63□□□□□ -1.51
Usp47Q8BY87 Gm18330-201ENSMUST00000199246 547 ntBASIC5.63□□□□□ -1.51
Usp47Q8BY87 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
Usp47Q8BY87 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC5.63□□□□□ -1.51
Usp47Q8BY87 AC131117.1-201ENSMUST00000225154 1171 ntBASIC5.63□□□□□ -1.51
Usp47Q8BY87 AC117949.2-201ENSMUST00000225900 584 ntBASIC5.63□□□□□ -1.51
Usp47Q8BY87 AC125539.1-202ENSMUST00000226449 670 ntBASIC5.63□□□□□ -1.51
Usp47Q8BY87 AC100733.1-201ENSMUST00000228494 407 ntBASIC5.63□□□□□ -1.51
Usp47Q8BY87 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Usp47Q8BY87 n-R5s182-201ENSMUST00000083889 107 ntBASIC5.63□□□□□ -1.51
Usp47Q8BY87 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Usp47Q8BY87 Gm13712-201ENSMUST00000117484 2295 ntBASIC5.63□□□□□ -1.51
Usp47Q8BY87 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
Usp47Q8BY87 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Usp47Q8BY87 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Usp47Q8BY87 AC123705.2-201ENSMUST00000221653 2009 ntBASIC5.62□□□□□ -1.51
Usp47Q8BY87 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Usp47Q8BY87 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
Usp47Q8BY87 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
Usp47Q8BY87 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Usp47Q8BY87 Gm15994-201ENSMUST00000118029 402 ntBASIC5.62□□□□□ -1.51
Usp47Q8BY87 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms