Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm43513-201ENSMUST00000199779 1076 ntBASIC6.35□□□□□ -1.39
Trim56Q80VI1 Gm43892-201ENSMUST00000204373 265 ntBASIC6.35□□□□□ -1.39
Trim56Q80VI1 Gm4587-201ENSMUST00000209135 637 ntBASIC6.35□□□□□ -1.39
Trim56Q80VI1 AC159896.3-201ENSMUST00000215904 3835 ntBASIC6.35□□□□□ -1.39
Trim56Q80VI1 AC101677.1-201ENSMUST00000218590 158 ntBASIC6.35□□□□□ -1.39
Trim56Q80VI1 AC153800.1-201ENSMUST00000219212 365 ntBASIC6.35□□□□□ -1.39
Trim56Q80VI1 AC155922.1-201ENSMUST00000220100 373 ntBASIC6.35□□□□□ -1.39
Trim56Q80VI1 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC6.35□□□□□ -1.39
Trim56Q80VI1 Mir181a-1-201ENSMUST00000083631 87 ntBASIC6.35□□□□□ -1.39
Trim56Q80VI1 Mir412-201ENSMUST00000083636 80 ntBASIC6.35□□□□□ -1.39
Trim56Q80VI1 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim56Q80VI1 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trim56Q80VI1 AC151971.5-201ENSMUST00000214422 3254 ntBASIC6.35□□□□□ -1.39
Trim56Q80VI1 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
Trim56Q80VI1 Gm11743-201ENSMUST00000117385 1735 ntBASIC6.35□□□□□ -1.39
Trim56Q80VI1 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trim56Q80VI1 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC6.35□□□□□ -1.39
Trim56Q80VI1 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim56Q80VI1 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim56Q80VI1 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trim56Q80VI1 Gm44530-201ENSMUST00000207920 3559 ntBASIC6.34□□□□□ -1.39
Trim56Q80VI1 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Trim56Q80VI1 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Trim56Q80VI1 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Trim56Q80VI1 Gm44675-201ENSMUST00000208188 2927 ntBASIC6.34□□□□□ -1.39
Trim56Q80VI1 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Trim56Q80VI1 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim56Q80VI1 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim56Q80VI1 Gm24273-201ENSMUST00000102332 164 ntBASIC6.34□□□□□ -1.39
Trim56Q80VI1 Gm22266-201ENSMUST00000104011 138 ntBASIC6.34□□□□□ -1.39
Trim56Q80VI1 Gm26146-201ENSMUST00000104478 185 ntBASIC6.34□□□□□ -1.39
Trim56Q80VI1 Gm3940-201ENSMUST00000105087 432 ntBASIC6.34□□□□□ -1.39
Trim56Q80VI1 Gm14163-201ENSMUST00000117342 217 ntBASIC6.34□□□□□ -1.39
Trim56Q80VI1 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC6.34□□□□□ -1.39
Trim56Q80VI1 Gm14901-201ENSMUST00000119001 283 ntBASIC6.34□□□□□ -1.39
Trim56Q80VI1 Gm15803-201ENSMUST00000120118 394 ntBASIC6.34□□□□□ -1.39
Trim56Q80VI1 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC6.34□□□□□ -1.39
Trim56Q80VI1 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Trim56Q80VI1 Mir5106-201ENSMUST00000174936 73 ntBASIC6.34□□□□□ -1.39
Trim56Q80VI1 Gm23568-201ENSMUST00000177960 92 ntBASIC6.34□□□□□ -1.39
Trim56Q80VI1 Gm22166-201ENSMUST00000178419 121 ntBASIC6.34□□□□□ -1.39
Trim56Q80VI1 Gm23288-201ENSMUST00000179213 121 ntBASIC6.34□□□□□ -1.39
Trim56Q80VI1 Gm24829-201ENSMUST00000179245 92 ntBASIC6.34□□□□□ -1.39
Trim56Q80VI1 Gm8392-201ENSMUST00000185647 835 ntBASIC6.34□□□□□ -1.39
Trim56Q80VI1 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC6.34□□□□□ -1.39
Trim56Q80VI1 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Trim56Q80VI1 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Trim56Q80VI1 Gm37421-201ENSMUST00000193088 132 ntBASIC6.34□□□□□ -1.39
Trim56Q80VI1 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC6.34□□□□□ -1.39
Trim56Q80VI1 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC6.34□□□□□ -1.39
Trim56Q80VI1 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Trim56Q80VI1 Olfr936-202ENSMUST00000216912 937 ntBASIC6.34□□□□□ -1.39
Trim56Q80VI1 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Trim56Q80VI1 AC153924.1-201ENSMUST00000220117 312 ntBASIC6.34□□□□□ -1.39
Trim56Q80VI1 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC6.34□□□□□ -1.39
Trim56Q80VI1 Gm7768-201ENSMUST00000222988 597 ntBASIC6.34□□□□□ -1.39
Trim56Q80VI1 AC141425.1-201ENSMUST00000224989 265 ntBASIC6.34□□□□□ -1.39
Trim56Q80VI1 AV026068-231ENSMUST00000225862 482 ntBASIC6.34□□□□□ -1.39
Trim56Q80VI1 AC160120.1-201ENSMUST00000227446 663 ntBASIC6.34□□□□□ -1.39
Trim56Q80VI1 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Trim56Q80VI1 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC6.34□□□□□ -1.39
Trim56Q80VI1 Gm24043-201ENSMUST00000083108 116 ntBASIC6.34□□□□□ -1.39
Trim56Q80VI1 Gm18163-201ENSMUST00000197877 1643 ntBASIC6.34□□□□□ -1.39
Trim56Q80VI1 Gm38299-201ENSMUST00000193214 3789 ntBASIC6.34□□□□□ -1.39
Trim56Q80VI1 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
Trim56Q80VI1 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC6.34□□□□□ -1.39
Trim56Q80VI1 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim56Q80VI1 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Trim56Q80VI1 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
Trim56Q80VI1 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC6.34□□□□□ -1.4
Trim56Q80VI1 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC6.34□□□□□ -1.4
Trim56Q80VI1 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Trim56Q80VI1 Gm42860-201ENSMUST00000196492 3991 ntBASIC6.33□□□□□ -1.4
Trim56Q80VI1 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim56Q80VI1 Gm12633-201ENSMUST00000117742 1705 ntBASIC6.33□□□□□ -1.4
Trim56Q80VI1 AC122355.1-201ENSMUST00000228155 4184 ntBASIC6.33□□□□□ -1.4
Trim56Q80VI1 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Trim56Q80VI1 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Trim56Q80VI1 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC6.33□□□□□ -1.4
Trim56Q80VI1 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim56Q80VI1 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim56Q80VI1 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trim56Q80VI1 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Trim56Q80VI1 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trim56Q80VI1 Gm10936-201ENSMUST00000105264 252 ntBASIC6.33□□□□□ -1.4
Trim56Q80VI1 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
Trim56Q80VI1 Gm13733-201ENSMUST00000117290 535 ntBASIC6.33□□□□□ -1.4
Trim56Q80VI1 Gm12677-201ENSMUST00000118668 426 ntBASIC6.33□□□□□ -1.4
Trim56Q80VI1 Gm13488-201ENSMUST00000120419 179 ntBASIC6.33□□□□□ -1.4
Trim56Q80VI1 Gm6305-201ENSMUST00000121027 1012 ntBASIC6.33□□□□□ -1.4
Trim56Q80VI1 Gm11805-201ENSMUST00000121238 600 ntBASIC6.33□□□□□ -1.4
Trim56Q80VI1 Gm6031-201ENSMUST00000121314 1054 ntBASIC6.33□□□□□ -1.4
Trim56Q80VI1 Gm12110-201ENSMUST00000121601 579 ntBASIC6.33□□□□□ -1.4
Trim56Q80VI1 Gm11804-201ENSMUST00000121663 468 ntBASIC6.33□□□□□ -1.4
Trim56Q80VI1 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC6.33□□□□□ -1.4
Trim56Q80VI1 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC6.33□□□□□ -1.4
Trim56Q80VI1 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trim56Q80VI1 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC6.33□□□□□ -1.4
Trim56Q80VI1 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trim56Q80VI1 Gm11507-201ENSMUST00000156462 412 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms