Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Gm15212-201ENSMUST00000122403 466 ntBASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Gm25295-201ENSMUST00000122794 306 ntBASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Gm25655-201ENSMUST00000158465 290 ntBASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Gm16571-201ENSMUST00000159112 291 ntBASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Gm23799-201ENSMUST00000175559 120 ntBASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Gm37632-201ENSMUST00000191811 1142 ntBASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Gm38330-201ENSMUST00000192743 959 ntBASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Gm36985-201ENSMUST00000195595 379 ntBASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.85□□□□□ -1.63
Krt39Q6IFX4 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Gm43028-201ENSMUST00000202561 481 ntBASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Gm43925-201ENSMUST00000203498 206 ntBASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Gm34224-201ENSMUST00000204606 364 ntBASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Gm17766-201ENSMUST00000209223 442 ntBASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Gm45474-201ENSMUST00000209471 408 ntBASIC4.85□□□□□ -1.63
Krt39Q6IFX4 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Krt39Q6IFX4 AC153870.1-201ENSMUST00000219599 560 ntBASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Gm7045-201ENSMUST00000221466 605 ntBASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC4.85□□□□□ -1.63
Krt39Q6IFX4 AC151907.1-201ENSMUST00000228812 412 ntBASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Krt39Q6IFX4 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Olfr881-201ENSMUST00000074611 948 ntBASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Fbxw23-202ENSMUST00000198480 1388 ntBASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Gm42876-201ENSMUST00000196989 3215 ntBASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Krt39Q6IFX4 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Krt39Q6IFX4 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Krt39Q6IFX4 Neat1-201ENSMUST00000173672 20771 ntBASIC4.84□□□□□ -1.63
Krt39Q6IFX4 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Krt39Q6IFX4 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Krt39Q6IFX4 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Krt39Q6IFX4 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Krt39Q6IFX4 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
Krt39Q6IFX4 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Krt39Q6IFX4 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Krt39Q6IFX4 Gm22543-201ENSMUST00000104347 94 ntBASIC4.84□□□□□ -1.63
Krt39Q6IFX4 Gm10552-201ENSMUST00000113396 372 ntBASIC4.84□□□□□ -1.63
Krt39Q6IFX4 Gm14786-201ENSMUST00000117127 944 ntBASIC4.84□□□□□ -1.63
Krt39Q6IFX4 Gm12520-201ENSMUST00000117493 316 ntBASIC4.84□□□□□ -1.63
Krt39Q6IFX4 Gm12112-201ENSMUST00000117772 231 ntBASIC4.84□□□□□ -1.63
Krt39Q6IFX4 Gm12465-201ENSMUST00000118591 300 ntBASIC4.84□□□□□ -1.63
Krt39Q6IFX4 Gm14714-201ENSMUST00000119743 439 ntBASIC4.84□□□□□ -1.63
Krt39Q6IFX4 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC4.84□□□□□ -1.63
Krt39Q6IFX4 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Krt39Q6IFX4 Gm22646-201ENSMUST00000175130 115 ntBASIC4.84□□□□□ -1.63
Krt39Q6IFX4 Gm25534-201ENSMUST00000175365 125 ntBASIC4.84□□□□□ -1.63
Krt39Q6IFX4 Gm22243-201ENSMUST00000178754 120 ntBASIC4.84□□□□□ -1.63
Krt39Q6IFX4 Gm4412-201ENSMUST00000186660 433 ntBASIC4.84□□□□□ -1.63
Krt39Q6IFX4 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Krt39Q6IFX4 Gm29610-201ENSMUST00000187749 453 ntBASIC4.84□□□□□ -1.63
Krt39Q6IFX4 Gm5288-201ENSMUST00000198323 1119 ntBASIC4.84□□□□□ -1.63
Krt39Q6IFX4 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC4.84□□□□□ -1.63
Krt39Q6IFX4 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Krt39Q6IFX4 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC4.84□□□□□ -1.63
Krt39Q6IFX4 Gm17915-201ENSMUST00000222077 548 ntBASIC4.84□□□□□ -1.63
Krt39Q6IFX4 AC154184.2-201ENSMUST00000225335 349 ntBASIC4.84□□□□□ -1.63
Krt39Q6IFX4 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Krt39Q6IFX4 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Krt39Q6IFX4 Gm8724-201ENSMUST00000081668 483 ntBASIC4.84□□□□□ -1.63
Krt39Q6IFX4 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Krt39Q6IFX4 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Krt39Q6IFX4 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
Krt39Q6IFX4 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.84□□□□□ -1.64
Krt39Q6IFX4 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Krt39Q6IFX4 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Krt39Q6IFX4 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Krt39Q6IFX4 Gm44321-201ENSMUST00000204262 2855 ntBASIC4.83□□□□□ -1.64
Krt39Q6IFX4 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Krt39Q6IFX4 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Krt39Q6IFX4 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Krt39Q6IFX4 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Krt39Q6IFX4 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Krt39Q6IFX4 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Krt39Q6IFX4 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Krt39Q6IFX4 Gm11914-201ENSMUST00000117094 507 ntBASIC4.83□□□□□ -1.64
Krt39Q6IFX4 Gm15361-201ENSMUST00000119320 444 ntBASIC4.83□□□□□ -1.64
Krt39Q6IFX4 Gm12237-201ENSMUST00000120158 470 ntBASIC4.83□□□□□ -1.64
Krt39Q6IFX4 Gm11349-201ENSMUST00000122209 1116 ntBASIC4.83□□□□□ -1.64
Krt39Q6IFX4 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Krt39Q6IFX4 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Krt39Q6IFX4 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC4.83□□□□□ -1.64
Krt39Q6IFX4 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Krt39Q6IFX4 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Krt39Q6IFX4 Gm2950-201ENSMUST00000185530 520 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms