Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.42□□□□□ -1.7
Sdc3Q64519 AC131743.1-201ENSMUST00000222138 4024 ntBASIC4.42□□□□□ -1.7
Sdc3Q64519 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Sdc3Q64519 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Sdc3Q64519 Gm43341-201ENSMUST00000200104 1308 ntBASIC4.42□□□□□ -1.7
Sdc3Q64519 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Sdc3Q64519 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Sdc3Q64519 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Sdc3Q64519 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Sdc3Q64519 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Sdc3Q64519 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Sdc3Q64519 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.41□□□□□ -1.7
Sdc3Q64519 Gm42842-201ENSMUST00000197736 3004 ntBASIC4.41□□□□□ -1.7
Sdc3Q64519 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Sdc3Q64519 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.41□□□□□ -1.7
Sdc3Q64519 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Sdc3Q64519 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Sdc3Q64519 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Sdc3Q64519 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Sdc3Q64519 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Sdc3Q64519 Gm22473-201ENSMUST00000104114 132 ntBASIC4.41□□□□□ -1.7
Sdc3Q64519 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Sdc3Q64519 Gm22676-201ENSMUST00000116972 129 ntBASIC4.41□□□□□ -1.7
Sdc3Q64519 Gm15745-201ENSMUST00000119807 115 ntBASIC4.41□□□□□ -1.7
Sdc3Q64519 Gm13220-201ENSMUST00000121535 508 ntBASIC4.41□□□□□ -1.7
Sdc3Q64519 Gm14977-201ENSMUST00000121626 812 ntBASIC4.41□□□□□ -1.7
Sdc3Q64519 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.41□□□□□ -1.7
Sdc3Q64519 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Sdc3Q64519 Gm22819-201ENSMUST00000157445 303 ntBASIC4.41□□□□□ -1.7
Sdc3Q64519 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Sdc3Q64519 Gm28438-201ENSMUST00000188299 345 ntBASIC4.41□□□□□ -1.7
Sdc3Q64519 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC4.41□□□□□ -1.7
Sdc3Q64519 Gm37209-201ENSMUST00000194109 1276 ntBASIC4.41□□□□□ -1.7
Sdc3Q64519 Gm43828-201ENSMUST00000196890 639 ntBASIC4.41□□□□□ -1.7
Sdc3Q64519 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC4.41□□□□□ -1.7
Sdc3Q64519 Gm44088-201ENSMUST00000204595 237 ntBASIC4.41□□□□□ -1.7
Sdc3Q64519 Gm33626-201ENSMUST00000206790 828 ntBASIC4.41□□□□□ -1.7
Sdc3Q64519 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC4.41□□□□□ -1.7
Sdc3Q64519 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC4.41□□□□□ -1.7
Sdc3Q64519 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Sdc3Q64519 Gm45651-201ENSMUST00000210857 335 ntBASIC4.41□□□□□ -1.7
Sdc3Q64519 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Sdc3Q64519 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC4.41□□□□□ -1.7
Sdc3Q64519 AC158807.1-201ENSMUST00000217959 187 ntBASIC4.41□□□□□ -1.7
Sdc3Q64519 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.41□□□□□ -1.7
Sdc3Q64519 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.41□□□□□ -1.7
Sdc3Q64519 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Sdc3Q64519 Gm6863-201ENSMUST00000052882 636 ntBASIC4.41□□□□□ -1.7
Sdc3Q64519 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Sdc3Q64519 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Sdc3Q64519 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.41□□□□□ -1.7
Sdc3Q64519 Gm13477-201ENSMUST00000121620 2687 ntBASIC4.41□□□□□ -1.7
Sdc3Q64519 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Sdc3Q64519 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Sdc3Q64519 Gm37718-201ENSMUST00000191655 2631 ntBASIC4.41□□□□□ -1.7
Sdc3Q64519 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Sdc3Q64519 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.7
Sdc3Q64519 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Sdc3Q64519 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Sdc3Q64519 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Sdc3Q64519 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
Sdc3Q64519 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Sdc3Q64519 Gm14854-201ENSMUST00000117758 841 ntBASIC4.4□□□□□ -1.71
Sdc3Q64519 Gm15361-201ENSMUST00000119320 444 ntBASIC4.4□□□□□ -1.71
Sdc3Q64519 Gm11708-201ENSMUST00000119530 832 ntBASIC4.4□□□□□ -1.71
Sdc3Q64519 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC4.4□□□□□ -1.71
Sdc3Q64519 Gm13080-201ENSMUST00000120556 420 ntBASIC4.4□□□□□ -1.71
Sdc3Q64519 Gm12372-201ENSMUST00000121654 768 ntBASIC4.4□□□□□ -1.71
Sdc3Q64519 Gm15274-201ENSMUST00000131442 291 ntBASIC4.4□□□□□ -1.71
Sdc3Q64519 Gm21979-201ENSMUST00000139887 291 ntBASIC4.4□□□□□ -1.71
Sdc3Q64519 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC4.4□□□□□ -1.71
Sdc3Q64519 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Sdc3Q64519 Gm15259-201ENSMUST00000151262 291 ntBASIC4.4□□□□□ -1.71
Sdc3Q64519 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC4.4□□□□□ -1.71
Sdc3Q64519 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC4.4□□□□□ -1.71
Sdc3Q64519 Gm22601-201ENSMUST00000157595 250 ntBASIC4.4□□□□□ -1.71
Sdc3Q64519 Gm25971-201ENSMUST00000158953 286 ntBASIC4.4□□□□□ -1.71
Sdc3Q64519 Gm3077-201ENSMUST00000165903 627 ntBASIC4.4□□□□□ -1.71
Sdc3Q64519 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Sdc3Q64519 Gm25598-201ENSMUST00000179031 107 ntBASIC4.4□□□□□ -1.71
Sdc3Q64519 Gm16378-201ENSMUST00000179168 342 ntBASIC4.4□□□□□ -1.71
Sdc3Q64519 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Sdc3Q64519 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC4.4□□□□□ -1.71
Sdc3Q64519 Gm37219-201ENSMUST00000192036 926 ntBASIC4.4□□□□□ -1.71
Sdc3Q64519 Gm8599-201ENSMUST00000193033 457 ntBASIC4.4□□□□□ -1.71
Sdc3Q64519 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC4.4□□□□□ -1.71
Sdc3Q64519 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC4.4□□□□□ -1.71
Sdc3Q64519 Gm44474-201ENSMUST00000196525 127 ntBASIC4.4□□□□□ -1.71
Sdc3Q64519 Gm43478-201ENSMUST00000200381 292 ntBASIC4.4□□□□□ -1.71
Sdc3Q64519 Gm44919-201ENSMUST00000208587 1073 ntBASIC4.4□□□□□ -1.71
Sdc3Q64519 Gm19170-201ENSMUST00000212440 1084 ntBASIC4.4□□□□□ -1.71
Sdc3Q64519 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC4.4□□□□□ -1.71
Sdc3Q64519 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC4.4□□□□□ -1.71
Sdc3Q64519 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.4□□□□□ -1.71
Sdc3Q64519 Gm3338-201ENSMUST00000220982 269 ntBASIC4.4□□□□□ -1.71
Sdc3Q64519 AC154198.1-201ENSMUST00000222839 424 ntBASIC4.4□□□□□ -1.71
Sdc3Q64519 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Sdc3Q64519 AC154692.1-201ENSMUST00000228314 544 ntBASIC4.4□□□□□ -1.71
Sdc3Q64519 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC4.4□□□□□ -1.71
Sdc3Q64519 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms