Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Six4Q61321 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Six4Q61321 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC4.23□□□□□ -1.73
Six4Q61321 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Six4Q61321 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Six4Q61321 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Six4Q61321 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC4.23□□□□□ -1.73
Six4Q61321 Gm24664-201ENSMUST00000158939 100 ntBASIC4.23□□□□□ -1.73
Six4Q61321 Gm16571-201ENSMUST00000159112 291 ntBASIC4.23□□□□□ -1.73
Six4Q61321 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC4.23□□□□□ -1.73
Six4Q61321 Gm28975-201ENSMUST00000186412 686 ntBASIC4.23□□□□□ -1.73
Six4Q61321 Gm21139-201ENSMUST00000186594 877 ntBASIC4.23□□□□□ -1.73
Six4Q61321 Gm28859-201ENSMUST00000186650 616 ntBASIC4.23□□□□□ -1.73
Six4Q61321 Gm29634-201ENSMUST00000188467 696 ntBASIC4.23□□□□□ -1.73
Six4Q61321 Gm28699-201ENSMUST00000189193 696 ntBASIC4.23□□□□□ -1.73
Six4Q61321 Gm9238-201ENSMUST00000196181 329 ntBASIC4.23□□□□□ -1.73
Six4Q61321 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC4.23□□□□□ -1.73
Six4Q61321 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC4.23□□□□□ -1.73
Six4Q61321 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.23□□□□□ -1.73
Six4Q61321 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Six4Q61321 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Six4Q61321 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
Six4Q61321 Gm25147-201ENSMUST00000083030 105 ntBASIC4.23□□□□□ -1.73
Six4Q61321 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Six4Q61321 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Six4Q61321 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Six4Q61321 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Six4Q61321 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Six4Q61321 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Six4Q61321 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Six4Q61321 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Six4Q61321 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
Six4Q61321 Gm44624-201ENSMUST00000208700 2278 ntBASIC4.22□□□□□ -1.73
Six4Q61321 Snord65-201ENSMUST00000104269 72 ntBASIC4.22□□□□□ -1.73
Six4Q61321 Gm12173-201ENSMUST00000117622 273 ntBASIC4.22□□□□□ -1.73
Six4Q61321 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Six4Q61321 Gm13902-201ENSMUST00000120168 605 ntBASIC4.22□□□□□ -1.73
Six4Q61321 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC4.22□□□□□ -1.73
Six4Q61321 Gm12340-201ENSMUST00000121617 462 ntBASIC4.22□□□□□ -1.73
Six4Q61321 Gm12103-201ENSMUST00000121892 362 ntBASIC4.22□□□□□ -1.73
Six4Q61321 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Six4Q61321 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Six4Q61321 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC4.22□□□□□ -1.73
Six4Q61321 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC4.22□□□□□ -1.73
Six4Q61321 Gm25966-201ENSMUST00000157169 117 ntBASIC4.22□□□□□ -1.73
Six4Q61321 Gm16285-201ENSMUST00000162999 347 ntBASIC4.22□□□□□ -1.73
Six4Q61321 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Six4Q61321 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC4.22□□□□□ -1.73
Six4Q61321 Gm43855-201ENSMUST00000197462 507 ntBASIC4.22□□□□□ -1.73
Six4Q61321 Gm17887-201ENSMUST00000200194 547 ntBASIC4.22□□□□□ -1.73
Six4Q61321 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC4.22□□□□□ -1.73
Six4Q61321 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Six4Q61321 Gm45434-201ENSMUST00000210550 293 ntBASIC4.22□□□□□ -1.73
Six4Q61321 Gm39197-201ENSMUST00000212069 457 ntBASIC4.22□□□□□ -1.73
Six4Q61321 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Six4Q61321 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC4.22□□□□□ -1.73
Six4Q61321 AC129323.1-201ENSMUST00000216733 470 ntBASIC4.22□□□□□ -1.73
Six4Q61321 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC4.22□□□□□ -1.73
Six4Q61321 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.22□□□□□ -1.73
Six4Q61321 AC160756.1-201ENSMUST00000227266 235 ntBASIC4.22□□□□□ -1.73
Six4Q61321 AC154618.1-201ENSMUST00000227451 303 ntBASIC4.22□□□□□ -1.73
Six4Q61321 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Six4Q61321 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Six4Q61321 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Six4Q61321 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.22□□□□□ -1.73
Six4Q61321 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Six4Q61321 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
Six4Q61321 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Six4Q61321 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Six4Q61321 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.21□□□□□ -1.73
Six4Q61321 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.21□□□□□ -1.74
Six4Q61321 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Six4Q61321 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Six4Q61321 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.21□□□□□ -1.74
Six4Q61321 Gm15151-201ENSMUST00000117106 177 ntBASIC4.21□□□□□ -1.74
Six4Q61321 Gm14714-201ENSMUST00000119743 439 ntBASIC4.21□□□□□ -1.74
Six4Q61321 Gm26352-201ENSMUST00000158223 125 ntBASIC4.21□□□□□ -1.74
Six4Q61321 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.21□□□□□ -1.74
Six4Q61321 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.21□□□□□ -1.74
Six4Q61321 Gm25037-201ENSMUST00000175418 110 ntBASIC4.21□□□□□ -1.74
Six4Q61321 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC4.21□□□□□ -1.74
Six4Q61321 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC4.21□□□□□ -1.74
Six4Q61321 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC4.21□□□□□ -1.74
Six4Q61321 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC4.21□□□□□ -1.74
Six4Q61321 Gm28118-201ENSMUST00000185957 294 ntBASIC4.21□□□□□ -1.74
Six4Q61321 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Six4Q61321 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC4.21□□□□□ -1.74
Six4Q61321 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Six4Q61321 Ighv10-4-201ENSMUST00000193702 299 ntBASIC4.21□□□□□ -1.74
Six4Q61321 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.21□□□□□ -1.74
Six4Q61321 Gm36259-201ENSMUST00000197340 392 ntBASIC4.21□□□□□ -1.74
Six4Q61321 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Six4Q61321 Gm46138-201ENSMUST00000215294 426 ntBASIC4.21□□□□□ -1.74
Six4Q61321 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.21□□□□□ -1.74
Six4Q61321 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC4.21□□□□□ -1.74
Six4Q61321 AC156803.1-201ENSMUST00000224407 820 ntBASIC4.21□□□□□ -1.74
Six4Q61321 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.21□□□□□ -1.74
Six4Q61321 AC141884.1-201ENSMUST00000226327 636 ntBASIC4.21□□□□□ -1.74
Six4Q61321 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Six4Q61321 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms