Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm43892-201ENSMUST00000204373 265 ntBASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Gm3816-201ENSMUST00000209803 433 ntBASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC4.16□□□□□ -1.74
Trim40Q3UWA4 AC154657.1-201ENSMUST00000226394 775 ntBASIC4.16□□□□□ -1.74
Trim40Q3UWA4 AC154239.2-201ENSMUST00000227859 233 ntBASIC4.16□□□□□ -1.74
Trim40Q3UWA4 AC125539.2-202ENSMUST00000227983 587 ntBASIC4.16□□□□□ -1.74
Trim40Q3UWA4 AC133910.1-201ENSMUST00000228128 624 ntBASIC4.16□□□□□ -1.74
Trim40Q3UWA4 AC125539.2-201ENSMUST00000228339 753 ntBASIC4.16□□□□□ -1.74
Trim40Q3UWA4 AC166574.7-201ENSMUST00000228502 704 ntBASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Gm6043-201ENSMUST00000099961 492 ntBASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.16□□□□□ -1.74
Trim40Q3UWA4 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Trim40Q3UWA4 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Gm12667-201ENSMUST00000118299 1332 ntBASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Trim40Q3UWA4 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.15□□□□□ -1.74
Trim40Q3UWA4 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Trim40Q3UWA4 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Trim40Q3UWA4 Gm42717-201ENSMUST00000197309 3463 ntBASIC4.15□□□□□ -1.74
Trim40Q3UWA4 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
Trim40Q3UWA4 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Trim40Q3UWA4 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
Trim40Q3UWA4 Gm42704-201ENSMUST00000196875 1778 ntBASIC4.15□□□□□ -1.74
Trim40Q3UWA4 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC4.15□□□□□ -1.74
Trim40Q3UWA4 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Trim40Q3UWA4 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Gm4596-201ENSMUST00000117197 442 ntBASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Gm8475-201ENSMUST00000118211 526 ntBASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Gm14554-201ENSMUST00000119548 661 ntBASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Gm12734-201ENSMUST00000120228 948 ntBASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Gm13788-201ENSMUST00000120767 601 ntBASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Gm11446-201ENSMUST00000121319 866 ntBASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Gm26098-201ENSMUST00000157247 288 ntBASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Gm24774-201ENSMUST00000157384 134 ntBASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Gm24898-201ENSMUST00000158133 106 ntBASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Gm24773-201ENSMUST00000158513 99 ntBASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Mir7008-201ENSMUST00000184398 63 ntBASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Gm28500-201ENSMUST00000190286 151 ntBASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Gm37002-201ENSMUST00000194560 373 ntBASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Gm9245-201ENSMUST00000200528 983 ntBASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Gm44138-201ENSMUST00000204939 271 ntBASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC4.15□□□□□ -1.75
Trim40Q3UWA4 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC4.15□□□□□ -1.75
Trim40Q3UWA4 AC152979.3-201ENSMUST00000217720 479 ntBASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Gm5649-201ENSMUST00000217918 951 ntBASIC4.15□□□□□ -1.75
Trim40Q3UWA4 AC158631.2-201ENSMUST00000219999 478 ntBASIC4.15□□□□□ -1.75
Trim40Q3UWA4 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Trim40Q3UWA4 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.15□□□□□ -1.75
Trim40Q3UWA4 CT025525.1-201ENSMUST00000226325 1054 ntBASIC4.15□□□□□ -1.75
Trim40Q3UWA4 AC167013.2-202ENSMUST00000227035 333 ntBASIC4.15□□□□□ -1.75
Trim40Q3UWA4 CT025525.3-201ENSMUST00000228858 366 ntBASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Gm6863-201ENSMUST00000052882 636 ntBASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Trim40Q3UWA4 AC124446.1-201ENSMUST00000221027 2644 ntBASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Trim40Q3UWA4 Gm7451-201ENSMUST00000208382 1392 ntBASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Gm23424-201ENSMUST00000103889 110 ntBASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Gm23322-201ENSMUST00000104464 167 ntBASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Gm12230-201ENSMUST00000118301 454 ntBASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Gm12231-201ENSMUST00000119447 695 ntBASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Gm6565-201ENSMUST00000121217 438 ntBASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Gm11759-201ENSMUST00000121742 464 ntBASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Gm16254-201ENSMUST00000131528 730 ntBASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Gm23585-201ENSMUST00000157656 102 ntBASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Gm25898-201ENSMUST00000158303 106 ntBASIC4.14□□□□□ -1.75
Trim40Q3UWA4 Gm23700-201ENSMUST00000158842 102 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms