Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm20415-201ENSMUST00000172877 423 ntBASIC4.41□□□□□ -1.7
Trim63Q38HM4 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC4.41□□□□□ -1.7
Trim63Q38HM4 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Trim63Q38HM4 Gm22548-201ENSMUST00000174899 78 ntBASIC4.41□□□□□ -1.7
Trim63Q38HM4 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Trim63Q38HM4 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Trim63Q38HM4 Gm5473-201ENSMUST00000179326 642 ntBASIC4.41□□□□□ -1.7
Trim63Q38HM4 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Trim63Q38HM4 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Trim63Q38HM4 Gm27477-201ENSMUST00000184649 143 ntBASIC4.41□□□□□ -1.7
Trim63Q38HM4 Gm28623-201ENSMUST00000187219 192 ntBASIC4.41□□□□□ -1.7
Trim63Q38HM4 Gm29516-201ENSMUST00000190402 468 ntBASIC4.41□□□□□ -1.7
Trim63Q38HM4 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC4.41□□□□□ -1.7
Trim63Q38HM4 Gm42708-201ENSMUST00000196332 905 ntBASIC4.41□□□□□ -1.7
Trim63Q38HM4 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC4.41□□□□□ -1.7
Trim63Q38HM4 Gm8458-201ENSMUST00000196658 819 ntBASIC4.41□□□□□ -1.7
Trim63Q38HM4 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC4.41□□□□□ -1.7
Trim63Q38HM4 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Trim63Q38HM4 Gm44076-201ENSMUST00000203072 520 ntBASIC4.41□□□□□ -1.7
Trim63Q38HM4 Gm45026-201ENSMUST00000205292 833 ntBASIC4.41□□□□□ -1.7
Trim63Q38HM4 Gm9278-201ENSMUST00000205508 553 ntBASIC4.41□□□□□ -1.7
Trim63Q38HM4 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC4.41□□□□□ -1.7
Trim63Q38HM4 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC4.41□□□□□ -1.7
Trim63Q38HM4 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC4.41□□□□□ -1.7
Trim63Q38HM4 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC4.41□□□□□ -1.7
Trim63Q38HM4 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC4.41□□□□□ -1.7
Trim63Q38HM4 Gm46436-201ENSMUST00000221851 1294 ntBASIC4.41□□□□□ -1.7
Trim63Q38HM4 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC4.41□□□□□ -1.7
Trim63Q38HM4 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Trim63Q38HM4 Gm22265-201ENSMUST00000082947 116 ntBASIC4.41□□□□□ -1.7
Trim63Q38HM4 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Trim63Q38HM4 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Trim63Q38HM4 Gm42559-201ENSMUST00000201811 3532 ntBASIC4.41□□□□□ -1.7
Trim63Q38HM4 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
Trim63Q38HM4 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Trim63Q38HM4 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Trim63Q38HM4 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Trim63Q38HM4 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Trim63Q38HM4 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
Trim63Q38HM4 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Trim63Q38HM4 Gm37802-201ENSMUST00000194998 2643 ntBASIC4.41□□□□□ -1.7
Trim63Q38HM4 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
Trim63Q38HM4 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC4.4□□□□□ -1.7
Trim63Q38HM4 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Trim63Q38HM4 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Trim63Q38HM4 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Trim63Q38HM4 Mir879-201ENSMUST00000104703 76 ntBASIC4.4□□□□□ -1.71
Trim63Q38HM4 Mir883a-201ENSMUST00000104824 76 ntBASIC4.4□□□□□ -1.71
Trim63Q38HM4 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Trim63Q38HM4 Gm12994-201ENSMUST00000119601 447 ntBASIC4.4□□□□□ -1.71
Trim63Q38HM4 Gm12104-201ENSMUST00000120359 979 ntBASIC4.4□□□□□ -1.71
Trim63Q38HM4 Gm14331-201ENSMUST00000120396 409 ntBASIC4.4□□□□□ -1.71
Trim63Q38HM4 Gm15529-201ENSMUST00000121833 994 ntBASIC4.4□□□□□ -1.71
Trim63Q38HM4 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC4.4□□□□□ -1.71
Trim63Q38HM4 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Trim63Q38HM4 Gm24647-201ENSMUST00000157112 113 ntBASIC4.4□□□□□ -1.71
Trim63Q38HM4 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Trim63Q38HM4 Gm3102-201ENSMUST00000164236 489 ntBASIC4.4□□□□□ -1.71
Trim63Q38HM4 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Trim63Q38HM4 Gm17064-201ENSMUST00000167690 452 ntBASIC4.4□□□□□ -1.71
Trim63Q38HM4 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC4.4□□□□□ -1.71
Trim63Q38HM4 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC4.4□□□□□ -1.71
Trim63Q38HM4 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Trim63Q38HM4 Gm27676-201ENSMUST00000183669 61 ntBASIC4.4□□□□□ -1.71
Trim63Q38HM4 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC4.4□□□□□ -1.71
Trim63Q38HM4 Gm35212-201ENSMUST00000196672 606 ntBASIC4.4□□□□□ -1.71
Trim63Q38HM4 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Trim63Q38HM4 Gm44316-201ENSMUST00000199274 97 ntBASIC4.4□□□□□ -1.71
Trim63Q38HM4 Gm19131-201ENSMUST00000203408 789 ntBASIC4.4□□□□□ -1.71
Trim63Q38HM4 Gm29754-201ENSMUST00000206269 358 ntBASIC4.4□□□□□ -1.71
Trim63Q38HM4 Gm5735-201ENSMUST00000207053 167 ntBASIC4.4□□□□□ -1.71
Trim63Q38HM4 Gm9604-201ENSMUST00000211175 433 ntBASIC4.4□□□□□ -1.71
Trim63Q38HM4 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC4.4□□□□□ -1.71
Trim63Q38HM4 Gm7380-201ENSMUST00000211599 466 ntBASIC4.4□□□□□ -1.71
Trim63Q38HM4 Gm45439-201ENSMUST00000211723 359 ntBASIC4.4□□□□□ -1.71
Trim63Q38HM4 Gm45874-201ENSMUST00000212423 346 ntBASIC4.4□□□□□ -1.71
Trim63Q38HM4 AL929555.1-201ENSMUST00000215283 509 ntBASIC4.4□□□□□ -1.71
Trim63Q38HM4 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC4.4□□□□□ -1.71
Trim63Q38HM4 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC4.4□□□□□ -1.71
Trim63Q38HM4 Gm4042-201ENSMUST00000216946 637 ntBASIC4.4□□□□□ -1.71
Trim63Q38HM4 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.4□□□□□ -1.71
Trim63Q38HM4 Gm31849-201ENSMUST00000220306 375 ntBASIC4.4□□□□□ -1.71
Trim63Q38HM4 AC159208.1-201ENSMUST00000221403 649 ntBASIC4.4□□□□□ -1.71
Trim63Q38HM4 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC4.4□□□□□ -1.71
Trim63Q38HM4 AC154431.2-201ENSMUST00000225215 1055 ntBASIC4.4□□□□□ -1.71
Trim63Q38HM4 AC115304.1-202ENSMUST00000226850 837 ntBASIC4.4□□□□□ -1.71
Trim63Q38HM4 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Trim63Q38HM4 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Trim63Q38HM4 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Trim63Q38HM4 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Trim63Q38HM4 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Trim63Q38HM4 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
Trim63Q38HM4 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Trim63Q38HM4 Gm10038-201ENSMUST00000077233 441 ntBASIC4.4□□□□□ -1.71
Trim63Q38HM4 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
Trim63Q38HM4 Gm24041-201ENSMUST00000083115 156 ntBASIC4.4□□□□□ -1.71
Trim63Q38HM4 Gm25008-201ENSMUST00000083809 81 ntBASIC4.4□□□□□ -1.71
Trim63Q38HM4 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Trim63Q38HM4 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Trim63Q38HM4 Gm44435-201ENSMUST00000204379 4119 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 116 ms