Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm13627-201ENSMUST00000119700 706 ntBASIC6.21□□□□□ -1.42
Col6a1Q04857 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC6.21□□□□□ -1.42
Col6a1Q04857 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a1Q04857 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC6.21□□□□□ -1.42
Col6a1Q04857 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a1Q04857 Gm22101-201ENSMUST00000157928 103 ntBASIC6.21□□□□□ -1.42
Col6a1Q04857 Gm25655-201ENSMUST00000158465 290 ntBASIC6.21□□□□□ -1.42
Col6a1Q04857 Gm19932-201ENSMUST00000177033 313 ntBASIC6.21□□□□□ -1.42
Col6a1Q04857 Gm27266-201ENSMUST00000184521 123 ntBASIC6.21□□□□□ -1.42
Col6a1Q04857 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC6.21□□□□□ -1.42
Col6a1Q04857 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC6.21□□□□□ -1.42
Col6a1Q04857 Gm33952-201ENSMUST00000197795 408 ntBASIC6.21□□□□□ -1.42
Col6a1Q04857 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC6.21□□□□□ -1.42
Col6a1Q04857 Gm6520-201ENSMUST00000200636 410 ntBASIC6.21□□□□□ -1.42
Col6a1Q04857 Gm44108-201ENSMUST00000203525 422 ntBASIC6.21□□□□□ -1.42
Col6a1Q04857 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC6.21□□□□□ -1.42
Col6a1Q04857 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a1Q04857 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a1Q04857 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a1Q04857 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a1Q04857 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a1Q04857 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a1Q04857 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Col6a1Q04857 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a1Q04857 Gm11743-201ENSMUST00000117385 1735 ntBASIC6.21□□□□□ -1.42
Col6a1Q04857 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Col6a1Q04857 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC6.21□□□□□ -1.42
Col6a1Q04857 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a1Q04857 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a1Q04857 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a1Q04857 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC6.21□□□□□ -1.42
Col6a1Q04857 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a1Q04857 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC6.21□□□□□ -1.42
Col6a1Q04857 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col6a1Q04857 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
Col6a1Q04857 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC6.21□□□□□ -1.42
Col6a1Q04857 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a1Q04857 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a1Q04857 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Col6a1Q04857 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Col6a1Q04857 Gm45632-201ENSMUST00000211532 1888 ntBASIC6.2□□□□□ -1.42
Col6a1Q04857 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a1Q04857 Gm26255-201ENSMUST00000122492 103 ntBASIC6.2□□□□□ -1.42
Col6a1Q04857 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC6.2□□□□□ -1.42
Col6a1Q04857 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC6.2□□□□□ -1.42
Col6a1Q04857 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC6.2□□□□□ -1.42
Col6a1Q04857 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
Col6a1Q04857 Gm7609-204ENSMUST00000161424 461 ntBASIC6.2□□□□□ -1.42
Col6a1Q04857 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a1Q04857 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Col6a1Q04857 Gm18667-201ENSMUST00000186523 484 ntBASIC6.2□□□□□ -1.42
Col6a1Q04857 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC6.2□□□□□ -1.42
Col6a1Q04857 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC6.2□□□□□ -1.42
Col6a1Q04857 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC6.2□□□□□ -1.42
Col6a1Q04857 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
Col6a1Q04857 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Col6a1Q04857 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC6.2□□□□□ -1.42
Col6a1Q04857 Supt4b-201ENSMUST00000214434 351 ntBASIC6.2□□□□□ -1.42
Col6a1Q04857 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC6.2□□□□□ -1.42
Col6a1Q04857 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC6.2□□□□□ -1.42
Col6a1Q04857 AC104832.1-201ENSMUST00000222938 550 ntBASIC6.2□□□□□ -1.42
Col6a1Q04857 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Col6a1Q04857 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
Col6a1Q04857 Gm19335-201ENSMUST00000195836 2069 ntBASIC6.2□□□□□ -1.42
Col6a1Q04857 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a1Q04857 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
Col6a1Q04857 AC155167.2-201ENSMUST00000226127 1945 ntBASIC6.2□□□□□ -1.42
Col6a1Q04857 AC158779.2-201ENSMUST00000227902 1947 ntBASIC6.2□□□□□ -1.42
Col6a1Q04857 Abcc2-202ENSMUST00000099413 1926 ntBASIC6.2□□□□□ -1.42
Col6a1Q04857 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a1Q04857 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC6.2□□□□□ -1.42
Col6a1Q04857 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a1Q04857 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a1Q04857 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Col6a1Q04857 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Col6a1Q04857 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a1Q04857 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Col6a1Q04857 Gm9930-201ENSMUST00000066742 3151 ntBASIC6.2□□□□□ -1.42
Col6a1Q04857 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Col6a1Q04857 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a1Q04857 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a1Q04857 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Col6a1Q04857 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC6.19□□□□□ -1.42
Col6a1Q04857 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
Col6a1Q04857 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a1Q04857 Gm43164-201ENSMUST00000202529 2128 ntBASIC6.19□□□□□ -1.42
Col6a1Q04857 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC6.19□□□□□ -1.42
Col6a1Q04857 AC122887.2-201ENSMUST00000219465 1603 ntBASIC6.19□□□□□ -1.42
Col6a1Q04857 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
Col6a1Q04857 n-R5s201-201ENSMUST00000122622 116 ntBASIC6.19□□□□□ -1.42
Col6a1Q04857 Gm15899-201ENSMUST00000128586 238 ntBASIC6.19□□□□□ -1.42
Col6a1Q04857 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC6.19□□□□□ -1.42
Col6a1Q04857 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC6.19□□□□□ -1.42
Col6a1Q04857 Gm11507-201ENSMUST00000156462 412 ntBASIC6.19□□□□□ -1.42
Col6a1Q04857 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC6.19□□□□□ -1.42
Col6a1Q04857 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a1Q04857 Gm26925-201ENSMUST00000182470 957 ntBASIC6.19□□□□□ -1.42
Col6a1Q04857 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC6.19□□□□□ -1.42
Col6a1Q04857 Gm28016-201ENSMUST00000184594 196 ntBASIC6.19□□□□□ -1.42
Col6a1Q04857 Gm28116-201ENSMUST00000189064 387 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms