Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm25860-201ENSMUST00000158252 126 ntBASIC2.76□□□□□ -1.97
PrkdcP97313 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PrkdcP97313 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
PrkdcP97313 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PrkdcP97313 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PrkdcP97313 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PrkdcP97313 AC117949.2-201ENSMUST00000225900 584 ntBASIC2.76□□□□□ -1.97
PrkdcP97313 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.76□□□□□ -1.97
PrkdcP97313 AC166369.1-201ENSMUST00000228126 351 ntBASIC2.76□□□□□ -1.97
PrkdcP97313 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
PrkdcP97313 Gm37345-201ENSMUST00000193062 3138 ntBASIC2.76□□□□□ -1.97
PrkdcP97313 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
PrkdcP97313 Naca-202ENSMUST00000092048 6745 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PrkdcP97313 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
PrkdcP97313 Gm38248-201ENSMUST00000193744 5783 ntBASIC2.76□□□□□ -1.97
PrkdcP97313 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC2.76□□□□□ -1.97
PrkdcP97313 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
PrkdcP97313 Gm23198-201ENSMUST00000158811 91 ntBASIC2.76□□□□□ -1.97
PrkdcP97313 Gm18350-201ENSMUST00000187395 955 ntBASIC2.76□□□□□ -1.97
PrkdcP97313 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC2.76□□□□□ -1.97
PrkdcP97313 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PrkdcP97313 Gm44779-201ENSMUST00000206937 708 ntBASIC2.76□□□□□ -1.97
PrkdcP97313 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PrkdcP97313 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC2.76□□□□□ -1.97
PrkdcP97313 AC144798.1-201ENSMUST00000228120 391 ntBASIC2.76□□□□□ -1.97
PrkdcP97313 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC2.76□□□□□ -1.97
PrkdcP97313 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
PrkdcP97313 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PrkdcP97313 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
PrkdcP97313 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
PrkdcP97313 AC153969.1-201ENSMUST00000214047 2605 ntBASIC2.76□□□□□ -1.97
PrkdcP97313 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PrkdcP97313 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PrkdcP97313 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PrkdcP97313 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PrkdcP97313 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
PrkdcP97313 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC2.76□□□□□ -1.97
PrkdcP97313 Gm45222-201ENSMUST00000207029 4307 ntBASIC2.76□□□□□ -1.97
PrkdcP97313 Mir105-201ENSMUST00000104655 80 ntBASIC2.76□□□□□ -1.97
PrkdcP97313 Gm15926-201ENSMUST00000120492 550 ntBASIC2.76□□□□□ -1.97
PrkdcP97313 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PrkdcP97313 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC2.76□□□□□ -1.97
PrkdcP97313 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PrkdcP97313 Gm37814-201ENSMUST00000195820 3644 ntBASIC2.76□□□□□ -1.97
PrkdcP97313 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PrkdcP97313 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
PrkdcP97313 AC152162.1-201ENSMUST00000225910 2917 ntBASIC2.76□□□□□ -1.97
PrkdcP97313 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
PrkdcP97313 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
PrkdcP97313 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
PrkdcP97313 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PrkdcP97313 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
PrkdcP97313 Gm4914-201ENSMUST00000119757 459 ntBASIC2.75□□□□□ -1.97
PrkdcP97313 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
PrkdcP97313 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
PrkdcP97313 Gm37355-201ENSMUST00000193345 606 ntBASIC2.75□□□□□ -1.97
PrkdcP97313 Gm23510-201ENSMUST00000083083 163 ntBASIC2.75□□□□□ -1.97
PrkdcP97313 Gm25630-201ENSMUST00000084000 162 ntBASIC2.75□□□□□ -1.97
PrkdcP97313 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
PrkdcP97313 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PrkdcP97313 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
PrkdcP97313 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC2.75□□□□□ -1.97
PrkdcP97313 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
PrkdcP97313 Gm44435-201ENSMUST00000204379 4119 ntBASIC2.75□□□□□ -1.97
PrkdcP97313 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
PrkdcP97313 Nek10-206ENSMUST00000224491 9567 ntAPPRIS P2 BASIC2.75□□□□□ -1.97
PrkdcP97313 Gm15553-201ENSMUST00000118757 430 ntBASIC2.75□□□□□ -1.97
PrkdcP97313 Gm26373-201ENSMUST00000157833 103 ntBASIC2.75□□□□□ -1.97
PrkdcP97313 Gm28190-201ENSMUST00000189766 722 ntBASIC2.75□□□□□ -1.97
PrkdcP97313 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC2.75□□□□□ -1.97
PrkdcP97313 AC142499.1-201ENSMUST00000220036 374 ntBASIC2.75□□□□□ -1.97
PrkdcP97313 AC154598.1-201ENSMUST00000227079 347 ntBASIC2.75□□□□□ -1.97
PrkdcP97313 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PrkdcP97313 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
PrkdcP97313 AF357428-201ENSMUST00000083815 69 ntBASIC2.75□□□□□ -1.97
PrkdcP97313 Gm37639-201ENSMUST00000191623 2785 ntBASIC2.75□□□□□ -1.97
PrkdcP97313 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PrkdcP97313 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PrkdcP97313 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
PrkdcP97313 Gm38269-201ENSMUST00000194549 3298 ntBASIC2.75□□□□□ -1.97
PrkdcP97313 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PrkdcP97313 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PrkdcP97313 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
PrkdcP97313 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
PrkdcP97313 Gm38057-201ENSMUST00000195551 3203 ntBASIC2.75□□□□□ -1.97
PrkdcP97313 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
PrkdcP97313 Gm11403-201ENSMUST00000122195 369 ntBASIC2.75□□□□□ -1.97
PrkdcP97313 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC2.75□□□□□ -1.97
PrkdcP97313 Mir7009-201ENSMUST00000184519 64 ntBASIC2.75□□□□□ -1.97
PrkdcP97313 Gm29634-201ENSMUST00000188467 696 ntBASIC2.75□□□□□ -1.97
PrkdcP97313 Gm28699-201ENSMUST00000189193 696 ntBASIC2.75□□□□□ -1.97
PrkdcP97313 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC2.75□□□□□ -1.97
PrkdcP97313 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
PrkdcP97313 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC2.75□□□□□ -1.97
PrkdcP97313 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
PrkdcP97313 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
PrkdcP97313 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
PrkdcP97313 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
PrkdcP97313 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
PrkdcP97313 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 111.7 ms