Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Sox3P53784 Gm16106-201ENSMUST00000119187 294 ntBASIC4.22□□□□□ -1.73
Sox3P53784 Gm4487-201ENSMUST00000150617 442 ntBASIC4.22□□□□□ -1.73
Sox3P53784 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC4.22□□□□□ -1.73
Sox3P53784 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Sox3P53784 Gm25817-201ENSMUST00000177758 121 ntBASIC4.22□□□□□ -1.73
Sox3P53784 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Sox3P53784 Gm24766-201ENSMUST00000179182 121 ntBASIC4.22□□□□□ -1.73
Sox3P53784 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Sox3P53784 Gm38270-201ENSMUST00000192721 407 ntBASIC4.22□□□□□ -1.73
Sox3P53784 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Sox3P53784 Gm44403-201ENSMUST00000198554 129 ntBASIC4.22□□□□□ -1.73
Sox3P53784 Gm2314-201ENSMUST00000200391 586 ntBASIC4.22□□□□□ -1.73
Sox3P53784 Gm45857-201ENSMUST00000212207 356 ntBASIC4.22□□□□□ -1.73
Sox3P53784 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.22□□□□□ -1.73
Sox3P53784 AC122448.1-201ENSMUST00000226317 772 ntBASIC4.22□□□□□ -1.73
Sox3P53784 Gm23407-201ENSMUST00000082538 91 ntBASIC4.22□□□□□ -1.73
Sox3P53784 Mir383-201ENSMUST00000083523 70 ntBASIC4.22□□□□□ -1.73
Sox3P53784 AC137842.3-201ENSMUST00000228855 2397 ntBASIC4.22□□□□□ -1.73
Sox3P53784 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Sox3P53784 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
Sox3P53784 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Sox3P53784 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Sox3P53784 Gm43990-201ENSMUST00000203790 1691 ntBASIC4.22□□□□□ -1.73
Sox3P53784 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Sox3P53784 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Sox3P53784 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Sox3P53784 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Sox3P53784 Gm35755-201ENSMUST00000222392 2077 ntBASIC4.22□□□□□ -1.73
Sox3P53784 AC174797.3-203ENSMUST00000225749 2078 ntBASIC4.22□□□□□ -1.73
Sox3P53784 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC4.21□□□□□ -1.73
Sox3P53784 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Sox3P53784 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Sox3P53784 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Sox3P53784 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
Sox3P53784 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Sox3P53784 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Sox3P53784 AC187103.2-201ENSMUST00000223605 1617 ntBASIC4.21□□□□□ -1.73
Sox3P53784 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.21□□□□□ -1.73
Sox3P53784 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.21□□□□□ -1.73
Sox3P53784 Gm42841-201ENSMUST00000199806 1932 ntBASIC4.21□□□□□ -1.74
Sox3P53784 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Sox3P53784 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Sox3P53784 Gm22498-201ENSMUST00000104497 86 ntBASIC4.21□□□□□ -1.74
Sox3P53784 Gm12978-201ENSMUST00000121250 522 ntBASIC4.21□□□□□ -1.74
Sox3P53784 Gm6079-201ENSMUST00000121356 404 ntBASIC4.21□□□□□ -1.74
Sox3P53784 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Sox3P53784 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.21□□□□□ -1.74
Sox3P53784 Gm24774-201ENSMUST00000157384 134 ntBASIC4.21□□□□□ -1.74
Sox3P53784 Gm24505-201ENSMUST00000157682 126 ntBASIC4.21□□□□□ -1.74
Sox3P53784 Gm24689-201ENSMUST00000157760 104 ntBASIC4.21□□□□□ -1.74
Sox3P53784 Gm23554-201ENSMUST00000157818 110 ntBASIC4.21□□□□□ -1.74
Sox3P53784 Gm24998-201ENSMUST00000157908 89 ntBASIC4.21□□□□□ -1.74
Sox3P53784 Gm25447-201ENSMUST00000158997 128 ntBASIC4.21□□□□□ -1.74
Sox3P53784 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Sox3P53784 Gm10074-201ENSMUST00000174543 249 ntBASIC4.21□□□□□ -1.74
Sox3P53784 Gm22859-201ENSMUST00000174978 122 ntBASIC4.21□□□□□ -1.74
Sox3P53784 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Sox3P53784 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Sox3P53784 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Sox3P53784 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Sox3P53784 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Sox3P53784 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC4.21□□□□□ -1.74
Sox3P53784 Gm4557-201ENSMUST00000185826 907 ntBASIC4.21□□□□□ -1.74
Sox3P53784 Gm28471-201ENSMUST00000185994 615 ntBASIC4.21□□□□□ -1.74
Sox3P53784 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC4.21□□□□□ -1.74
Sox3P53784 Gm8708-201ENSMUST00000188500 906 ntBASIC4.21□□□□□ -1.74
Sox3P53784 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Sox3P53784 Gm5660-201ENSMUST00000197453 1149 ntBASIC4.21□□□□□ -1.74
Sox3P53784 Gm17956-201ENSMUST00000199931 838 ntBASIC4.21□□□□□ -1.74
Sox3P53784 Gm4734-201ENSMUST00000200117 777 ntBASIC4.21□□□□□ -1.74
Sox3P53784 Gm17780-201ENSMUST00000207142 612 ntBASIC4.21□□□□□ -1.74
Sox3P53784 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Sox3P53784 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC4.21□□□□□ -1.74
Sox3P53784 Gm45499-201ENSMUST00000211656 280 ntBASIC4.21□□□□□ -1.74
Sox3P53784 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC4.21□□□□□ -1.74
Sox3P53784 Gm46138-201ENSMUST00000215294 426 ntBASIC4.21□□□□□ -1.74
Sox3P53784 CR974429.1-201ENSMUST00000220877 827 ntBASIC4.21□□□□□ -1.74
Sox3P53784 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Sox3P53784 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Sox3P53784 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Sox3P53784 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.21□□□□□ -1.74
Sox3P53784 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
Sox3P53784 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Sox3P53784 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
Sox3P53784 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Sox3P53784 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.21□□□□□ -1.74
Sox3P53784 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.21□□□□□ -1.74
Sox3P53784 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.2□□□□□ -1.74
Sox3P53784 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.2□□□□□ -1.74
Sox3P53784 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.2□□□□□ -1.74
Sox3P53784 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Sox3P53784 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Sox3P53784 Gm11406-201ENSMUST00000117418 484 ntBASIC4.2□□□□□ -1.74
Sox3P53784 Gm5754-201ENSMUST00000118774 892 ntBASIC4.2□□□□□ -1.74
Sox3P53784 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.2□□□□□ -1.74
Sox3P53784 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC4.2□□□□□ -1.74
Sox3P53784 Gm6031-201ENSMUST00000121314 1054 ntBASIC4.2□□□□□ -1.74
Sox3P53784 Gm12693-201ENSMUST00000121965 483 ntBASIC4.2□□□□□ -1.74
Sox3P53784 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms