Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Shmt1P50431 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.4□□□□□ -1.54
Shmt1P50431 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC5.4□□□□□ -1.54
Shmt1P50431 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Shmt1P50431 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.4□□□□□ -1.54
Shmt1P50431 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Shmt1P50431 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
Shmt1P50431 Mir193b-201ENSMUST00000103784 79 ntBASIC5.4□□□□□ -1.54
Shmt1P50431 Gm22032-201ENSMUST00000116946 116 ntBASIC5.4□□□□□ -1.54
Shmt1P50431 Gm13614-201ENSMUST00000117306 503 ntBASIC5.4□□□□□ -1.54
Shmt1P50431 Gm3267-201ENSMUST00000118671 473 ntBASIC5.4□□□□□ -1.54
Shmt1P50431 Gm14887-201ENSMUST00000119522 663 ntBASIC5.4□□□□□ -1.54
Shmt1P50431 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Shmt1P50431 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC5.4□□□□□ -1.54
Shmt1P50431 Gm24477-201ENSMUST00000157438 103 ntBASIC5.4□□□□□ -1.54
Shmt1P50431 Gm6395-201ENSMUST00000167639 691 ntBASIC5.4□□□□□ -1.54
Shmt1P50431 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Shmt1P50431 Gm9457-201ENSMUST00000180176 372 ntBASIC5.4□□□□□ -1.54
Shmt1P50431 Mir6416-201ENSMUST00000183664 117 ntBASIC5.4□□□□□ -1.54
Shmt1P50431 Gm28385-201ENSMUST00000185671 292 ntBASIC5.4□□□□□ -1.54
Shmt1P50431 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Shmt1P50431 Gm37193-201ENSMUST00000193087 513 ntBASIC5.4□□□□□ -1.54
Shmt1P50431 Gm9134-201ENSMUST00000193186 551 ntBASIC5.4□□□□□ -1.54
Shmt1P50431 Gm9442-201ENSMUST00000194242 319 ntBASIC5.4□□□□□ -1.54
Shmt1P50431 Igkv2-107-201ENSMUST00000196000 313 ntBASIC5.4□□□□□ -1.54
Shmt1P50431 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC5.4□□□□□ -1.54
Shmt1P50431 Gm44604-201ENSMUST00000205475 496 ntBASIC5.4□□□□□ -1.54
Shmt1P50431 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC5.4□□□□□ -1.54
Shmt1P50431 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.4□□□□□ -1.54
Shmt1P50431 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC5.4□□□□□ -1.54
Shmt1P50431 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC5.4□□□□□ -1.54
Shmt1P50431 CT025616.1-201ENSMUST00000221158 412 ntBASIC5.4□□□□□ -1.54
Shmt1P50431 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.4□□□□□ -1.54
Shmt1P50431 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC5.4□□□□□ -1.54
Shmt1P50431 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC5.4□□□□□ -1.54
Shmt1P50431 Gm9512-201ENSMUST00000223112 497 ntBASIC5.4□□□□□ -1.54
Shmt1P50431 AC124524.2-201ENSMUST00000223940 588 ntBASIC5.4□□□□□ -1.54
Shmt1P50431 AC131085.1-201ENSMUST00000224746 656 ntBASIC5.4□□□□□ -1.54
Shmt1P50431 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.4□□□□□ -1.54
Shmt1P50431 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Shmt1P50431 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Shmt1P50431 Gm24623-201ENSMUST00000082616 194 ntBASIC5.4□□□□□ -1.54
Shmt1P50431 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC5.4□□□□□ -1.54
Shmt1P50431 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
Shmt1P50431 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Shmt1P50431 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Shmt1P50431 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Shmt1P50431 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.4□□□□□ -1.55
Shmt1P50431 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Shmt1P50431 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Shmt1P50431 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.39□□□□□ -1.55
Shmt1P50431 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
Shmt1P50431 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Shmt1P50431 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Shmt1P50431 Gm24578-201ENSMUST00000103970 129 ntBASIC5.39□□□□□ -1.55
Shmt1P50431 Gm25419-201ENSMUST00000104215 191 ntBASIC5.39□□□□□ -1.55
Shmt1P50431 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Shmt1P50431 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Shmt1P50431 Gm11914-201ENSMUST00000117094 507 ntBASIC5.39□□□□□ -1.55
Shmt1P50431 Gm14995-201ENSMUST00000117135 391 ntBASIC5.39□□□□□ -1.55
Shmt1P50431 Gm16394-201ENSMUST00000117289 675 ntBASIC5.39□□□□□ -1.55
Shmt1P50431 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC5.39□□□□□ -1.55
Shmt1P50431 Gm14560-201ENSMUST00000118672 375 ntBASIC5.39□□□□□ -1.55
Shmt1P50431 Gm11909-201ENSMUST00000121424 759 ntBASIC5.39□□□□□ -1.55
Shmt1P50431 Gm11759-201ENSMUST00000121742 464 ntBASIC5.39□□□□□ -1.55
Shmt1P50431 Gm23885-201ENSMUST00000122682 294 ntBASIC5.39□□□□□ -1.55
Shmt1P50431 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Shmt1P50431 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC5.39□□□□□ -1.55
Shmt1P50431 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
Shmt1P50431 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC5.39□□□□□ -1.55
Shmt1P50431 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.39□□□□□ -1.55
Shmt1P50431 Gm5842-201ENSMUST00000195073 622 ntBASIC5.39□□□□□ -1.55
Shmt1P50431 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC5.39□□□□□ -1.55
Shmt1P50431 Gm32453-201ENSMUST00000204183 456 ntBASIC5.39□□□□□ -1.55
Shmt1P50431 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC5.39□□□□□ -1.55
Shmt1P50431 Gm20997-201ENSMUST00000205148 231 ntBASIC5.39□□□□□ -1.55
Shmt1P50431 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC5.39□□□□□ -1.55
Shmt1P50431 Gm44946-201ENSMUST00000208425 572 ntBASIC5.39□□□□□ -1.55
Shmt1P50431 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC5.39□□□□□ -1.55
Shmt1P50431 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Shmt1P50431 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC5.39□□□□□ -1.55
Shmt1P50431 AC102369.1-201ENSMUST00000218415 373 ntBASIC5.39□□□□□ -1.55
Shmt1P50431 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC5.39□□□□□ -1.55
Shmt1P50431 AC121599.1-201ENSMUST00000224276 449 ntBASIC5.39□□□□□ -1.55
Shmt1P50431 AC129935.1-201ENSMUST00000226302 873 ntBASIC5.39□□□□□ -1.55
Shmt1P50431 CT030662.2-201ENSMUST00000226942 805 ntBASIC5.39□□□□□ -1.55
Shmt1P50431 AC112142.1-206ENSMUST00000228136 982 ntBASIC5.39□□□□□ -1.55
Shmt1P50431 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Shmt1P50431 Gm7204-201ENSMUST00000062591 600 ntBASIC5.39□□□□□ -1.55
Shmt1P50431 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Shmt1P50431 Gm26330-201ENSMUST00000082817 104 ntBASIC5.39□□□□□ -1.55
Shmt1P50431 n-R5s170-201ENSMUST00000083726 113 ntBASIC5.39□□□□□ -1.55
Shmt1P50431 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Shmt1P50431 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Shmt1P50431 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Shmt1P50431 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Shmt1P50431 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.39□□□□□ -1.55
Shmt1P50431 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Shmt1P50431 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC5.39□□□□□ -1.55
Shmt1P50431 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms