Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Gm23452-201ENSMUST00000083327 107 ntBASIC4.82□□□□□ -1.64
Hoxc11P31313 Gm22829-201ENSMUST00000083771 106 ntBASIC4.82□□□□□ -1.64
Hoxc11P31313 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC4.82□□□□□ -1.64
Hoxc11P31313 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Hoxc11P31313 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Hoxc11P31313 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Hoxc11P31313 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Hoxc11P31313 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Hoxc11P31313 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.82□□□□□ -1.64
Hoxc11P31313 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Hoxc11P31313 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Hoxc11P31313 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Hoxc11P31313 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Hoxc11P31313 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Hoxc11P31313 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.81□□□□□ -1.64
Hoxc11P31313 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Hoxc11P31313 Gm3665-201ENSMUST00000177214 2461 ntBASIC4.81□□□□□ -1.64
Hoxc11P31313 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC4.81□□□□□ -1.64
Hoxc11P31313 Gm37514-201ENSMUST00000194512 2753 ntBASIC4.81□□□□□ -1.64
Hoxc11P31313 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
Hoxc11P31313 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Hoxc11P31313 Gm6429-201ENSMUST00000117144 475 ntBASIC4.81□□□□□ -1.64
Hoxc11P31313 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.81□□□□□ -1.64
Hoxc11P31313 Gm8129-201ENSMUST00000118230 213 ntBASIC4.81□□□□□ -1.64
Hoxc11P31313 Gm15480-201ENSMUST00000120442 519 ntBASIC4.81□□□□□ -1.64
Hoxc11P31313 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC4.81□□□□□ -1.64
Hoxc11P31313 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Hoxc11P31313 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Hoxc11P31313 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Hoxc11P31313 Gm24175-201ENSMUST00000158931 129 ntBASIC4.81□□□□□ -1.64
Hoxc11P31313 Gm17081-201ENSMUST00000167363 478 ntBASIC4.81□□□□□ -1.64
Hoxc11P31313 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC4.81□□□□□ -1.64
Hoxc11P31313 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC4.81□□□□□ -1.64
Hoxc11P31313 Mir5106-201ENSMUST00000174936 73 ntBASIC4.81□□□□□ -1.64
Hoxc11P31313 Gm25534-201ENSMUST00000175365 125 ntBASIC4.81□□□□□ -1.64
Hoxc11P31313 Gm27688-201ENSMUST00000183634 91 ntBASIC4.81□□□□□ -1.64
Hoxc11P31313 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC4.81□□□□□ -1.64
Hoxc11P31313 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Hoxc11P31313 Gm38201-201ENSMUST00000192143 387 ntBASIC4.81□□□□□ -1.64
Hoxc11P31313 Gm38008-201ENSMUST00000195333 518 ntBASIC4.81□□□□□ -1.64
Hoxc11P31313 Gm42694-201ENSMUST00000196951 358 ntBASIC4.81□□□□□ -1.64
Hoxc11P31313 Mir1892-201ENSMUST00000197752 80 ntBASIC4.81□□□□□ -1.64
Hoxc11P31313 Gm5317-201ENSMUST00000204445 847 ntBASIC4.81□□□□□ -1.64
Hoxc11P31313 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC4.81□□□□□ -1.64
Hoxc11P31313 Gm5750-201ENSMUST00000218711 801 ntBASIC4.81□□□□□ -1.64
Hoxc11P31313 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC4.81□□□□□ -1.64
Hoxc11P31313 Gm19134-201ENSMUST00000221203 487 ntBASIC4.81□□□□□ -1.64
Hoxc11P31313 Gm7822-201ENSMUST00000222433 581 ntBASIC4.81□□□□□ -1.64
Hoxc11P31313 Gm7040-201ENSMUST00000223271 443 ntBASIC4.81□□□□□ -1.64
Hoxc11P31313 Ap3m1-208ENSMUST00000224016 764 ntBASIC4.81□□□□□ -1.64
Hoxc11P31313 AC121114.1-201ENSMUST00000228522 570 ntBASIC4.81□□□□□ -1.64
Hoxc11P31313 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Hoxc11P31313 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Hoxc11P31313 Gm23455-201ENSMUST00000083331 100 ntBASIC4.81□□□□□ -1.64
Hoxc11P31313 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Hoxc11P31313 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC4.81□□□□□ -1.64
Hoxc11P31313 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC4.81□□□□□ -1.64
Hoxc11P31313 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.81□□□□□ -1.64
Hoxc11P31313 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Hoxc11P31313 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Hoxc11P31313 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Hoxc11P31313 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Hoxc11P31313 Gm19176-201ENSMUST00000222149 1831 ntBASIC4.81□□□□□ -1.64
Hoxc11P31313 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
Hoxc11P31313 Gm5925-201ENSMUST00000105016 1497 ntBASIC4.81□□□□□ -1.64
Hoxc11P31313 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Hoxc11P31313 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxc11P31313 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxc11P31313 Gm43059-201ENSMUST00000202437 1388 ntBASIC4.8□□□□□ -1.64
Hoxc11P31313 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Hoxc11P31313 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxc11P31313 AC124586.1-201ENSMUST00000221673 2795 ntBASIC4.8□□□□□ -1.64
Hoxc11P31313 AC147615.2-201ENSMUST00000219876 2154 ntBASIC4.8□□□□□ -1.64
Hoxc11P31313 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxc11P31313 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
Hoxc11P31313 Gm22899-201ENSMUST00000104540 131 ntBASIC4.8□□□□□ -1.64
Hoxc11P31313 Gm11898-201ENSMUST00000117161 385 ntBASIC4.8□□□□□ -1.64
Hoxc11P31313 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC4.8□□□□□ -1.64
Hoxc11P31313 Gm15297-201ENSMUST00000117795 290 ntBASIC4.8□□□□□ -1.64
Hoxc11P31313 Gm15772-201ENSMUST00000118533 438 ntBASIC4.8□□□□□ -1.64
Hoxc11P31313 Gm11790-201ENSMUST00000119569 455 ntBASIC4.8□□□□□ -1.64
Hoxc11P31313 Gm13484-201ENSMUST00000120738 412 ntBASIC4.8□□□□□ -1.64
Hoxc11P31313 Gm22478-201ENSMUST00000122570 154 ntBASIC4.8□□□□□ -1.64
Hoxc11P31313 Gm12854-201ENSMUST00000128518 297 ntBASIC4.8□□□□□ -1.64
Hoxc11P31313 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxc11P31313 Gm6647-201ENSMUST00000170514 641 ntBASIC4.8□□□□□ -1.64
Hoxc11P31313 Gm8214-201ENSMUST00000172123 351 ntBASIC4.8□□□□□ -1.64
Hoxc11P31313 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC4.8□□□□□ -1.64
Hoxc11P31313 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC4.8□□□□□ -1.64
Hoxc11P31313 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC4.8□□□□□ -1.64
Hoxc11P31313 Gm28503-201ENSMUST00000185966 147 ntBASIC4.8□□□□□ -1.64
Hoxc11P31313 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxc11P31313 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxc11P31313 Gm3496-201ENSMUST00000188283 745 ntBASIC4.8□□□□□ -1.64
Hoxc11P31313 Gm9687-201ENSMUST00000189312 602 ntBASIC4.8□□□□□ -1.64
Hoxc11P31313 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxc11P31313 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC4.8□□□□□ -1.64
Hoxc11P31313 Gm9632-201ENSMUST00000195934 643 ntBASIC4.8□□□□□ -1.64
Hoxc11P31313 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxc11P31313 Gm34224-201ENSMUST00000204606 364 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 98.1 ms