Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm18465-201ENSMUST00000207468 369 ntBASIC3.54□□□□□ -1.84
Sdc1P18828 Gm18464-201ENSMUST00000207803 420 ntBASIC3.54□□□□□ -1.84
Sdc1P18828 Gm18458-201ENSMUST00000207908 369 ntBASIC3.54□□□□□ -1.84
Sdc1P18828 Gm18461-201ENSMUST00000208421 420 ntBASIC3.54□□□□□ -1.84
Sdc1P18828 Gm33601-201ENSMUST00000210001 961 ntBASIC3.54□□□□□ -1.84
Sdc1P18828 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC3.54□□□□□ -1.84
Sdc1P18828 Gm18705-201ENSMUST00000215985 913 ntBASIC3.54□□□□□ -1.84
Sdc1P18828 AC153801.1-201ENSMUST00000217904 947 ntBASIC3.54□□□□□ -1.84
Sdc1P18828 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Sdc1P18828 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Sdc1P18828 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Sdc1P18828 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Sdc1P18828 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Sdc1P18828 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC3.54□□□□□ -1.84
Sdc1P18828 Gm24706-201ENSMUST00000082806 137 ntBASIC3.54□□□□□ -1.84
Sdc1P18828 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
Sdc1P18828 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Sdc1P18828 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Sdc1P18828 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Sdc1P18828 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
Sdc1P18828 Gm44435-201ENSMUST00000204379 4119 ntBASIC3.54□□□□□ -1.84
Sdc1P18828 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.53□□□□□ -1.84
Sdc1P18828 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Sdc1P18828 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
Sdc1P18828 Gm43886-201ENSMUST00000205039 2386 ntBASIC3.53□□□□□ -1.84
Sdc1P18828 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Sdc1P18828 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC3.53□□□□□ -1.84
Sdc1P18828 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC3.53□□□□□ -1.84
Sdc1P18828 AC158388.2-201ENSMUST00000223665 1314 ntBASIC3.53□□□□□ -1.84
Sdc1P18828 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Sdc1P18828 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Sdc1P18828 Gm45131-201ENSMUST00000208051 2582 ntBASIC3.53□□□□□ -1.84
Sdc1P18828 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Sdc1P18828 Gm26387-201ENSMUST00000104238 132 ntBASIC3.53□□□□□ -1.84
Sdc1P18828 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Sdc1P18828 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Sdc1P18828 Gm14772-201ENSMUST00000116562 514 ntBASIC3.53□□□□□ -1.84
Sdc1P18828 Gm15951-201ENSMUST00000118377 400 ntBASIC3.53□□□□□ -1.84
Sdc1P18828 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC3.53□□□□□ -1.84
Sdc1P18828 Gm12294-201ENSMUST00000119723 490 ntBASIC3.53□□□□□ -1.84
Sdc1P18828 Gm14589-201ENSMUST00000121640 727 ntBASIC3.53□□□□□ -1.84
Sdc1P18828 Gm12001-201ENSMUST00000121727 913 ntBASIC3.53□□□□□ -1.84
Sdc1P18828 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC3.53□□□□□ -1.84
Sdc1P18828 Gm12226-201ENSMUST00000144172 876 ntBASIC3.53□□□□□ -1.84
Sdc1P18828 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC3.53□□□□□ -1.84
Sdc1P18828 Gm24687-201ENSMUST00000157758 241 ntBASIC3.53□□□□□ -1.84
Sdc1P18828 Gm25898-201ENSMUST00000158303 106 ntBASIC3.53□□□□□ -1.84
Sdc1P18828 Gm20428-201ENSMUST00000174365 283 ntBASIC3.53□□□□□ -1.84
Sdc1P18828 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC3.53□□□□□ -1.84
Sdc1P18828 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC3.53□□□□□ -1.84
Sdc1P18828 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC3.53□□□□□ -1.84
Sdc1P18828 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC3.53□□□□□ -1.84
Sdc1P18828 Gm6055-201ENSMUST00000180532 378 ntBASIC3.53□□□□□ -1.84
Sdc1P18828 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
Sdc1P18828 Gm29563-201ENSMUST00000187249 496 ntBASIC3.53□□□□□ -1.84
Sdc1P18828 Gm5372-201ENSMUST00000187540 409 ntBASIC3.53□□□□□ -1.84
Sdc1P18828 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Sdc1P18828 Gm28920-201ENSMUST00000189957 699 ntBASIC3.53□□□□□ -1.84
Sdc1P18828 Gm28996-201ENSMUST00000190316 721 ntBASIC3.53□□□□□ -1.84
Sdc1P18828 Gm28655-201ENSMUST00000191538 692 ntBASIC3.53□□□□□ -1.84
Sdc1P18828 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC3.53□□□□□ -1.84
Sdc1P18828 Gm4742-201ENSMUST00000200261 771 ntBASIC3.53□□□□□ -1.84
Sdc1P18828 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Sdc1P18828 Gm44402-201ENSMUST00000203677 238 ntBASIC3.53□□□□□ -1.84
Sdc1P18828 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC3.53□□□□□ -1.84
Sdc1P18828 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
Sdc1P18828 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC3.53□□□□□ -1.84
Sdc1P18828 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC3.53□□□□□ -1.84
Sdc1P18828 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.53□□□□□ -1.84
Sdc1P18828 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC3.53□□□□□ -1.84
Sdc1P18828 AC154738.5-201ENSMUST00000227397 310 ntBASIC3.53□□□□□ -1.84
Sdc1P18828 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Sdc1P18828 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Sdc1P18828 Snord21-201ENSMUST00000082519 94 ntBASIC3.53□□□□□ -1.84
Sdc1P18828 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Sdc1P18828 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC3.53□□□□□ -1.84
Sdc1P18828 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.52□□□□□ -1.85
Sdc1P18828 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Sdc1P18828 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC3.52□□□□□ -1.85
Sdc1P18828 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.52□□□□□ -1.85
Sdc1P18828 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Sdc1P18828 AC153969.1-201ENSMUST00000214047 2605 ntBASIC3.52□□□□□ -1.85
Sdc1P18828 AC153964.1-201ENSMUST00000219677 3142 ntBASIC3.52□□□□□ -1.85
Sdc1P18828 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Sdc1P18828 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Sdc1P18828 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Sdc1P18828 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Sdc1P18828 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Sdc1P18828 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Sdc1P18828 Gm15933-201ENSMUST00000117215 616 ntBASIC3.52□□□□□ -1.85
Sdc1P18828 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Sdc1P18828 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC3.52□□□□□ -1.85
Sdc1P18828 Gm12392-201ENSMUST00000118014 938 ntBASIC3.52□□□□□ -1.85
Sdc1P18828 Gm13737-201ENSMUST00000119793 232 ntBASIC3.52□□□□□ -1.85
Sdc1P18828 Gm13743-201ENSMUST00000121486 724 ntBASIC3.52□□□□□ -1.85
Sdc1P18828 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Sdc1P18828 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Sdc1P18828 Gm26171-201ENSMUST00000158422 131 ntBASIC3.52□□□□□ -1.85
Sdc1P18828 Gm23702-201ENSMUST00000158840 130 ntBASIC3.52□□□□□ -1.85
Sdc1P18828 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms