Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm26057-201ENSMUST00000178099 165 ntBASIC6.18□□□□□ -1.42
RaraP11416 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC6.18□□□□□ -1.42
RaraP11416 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC6.18□□□□□ -1.42
RaraP11416 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC6.18□□□□□ -1.42
RaraP11416 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC6.18□□□□□ -1.42
RaraP11416 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC6.18□□□□□ -1.42
RaraP11416 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC6.18□□□□□ -1.42
RaraP11416 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC6.18□□□□□ -1.42
RaraP11416 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC6.18□□□□□ -1.42
RaraP11416 Rps12l1-201ENSMUST00000183090 399 ntBASIC6.18□□□□□ -1.42
RaraP11416 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC6.18□□□□□ -1.42
RaraP11416 Gm33973-201ENSMUST00000195148 534 ntBASIC6.18□□□□□ -1.42
RaraP11416 Gm6510-201ENSMUST00000195916 574 ntBASIC6.18□□□□□ -1.42
RaraP11416 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC6.18□□□□□ -1.42
RaraP11416 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC6.18□□□□□ -1.42
RaraP11416 Gm19900-201ENSMUST00000207285 576 ntBASIC6.18□□□□□ -1.42
RaraP11416 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
RaraP11416 Gm4032-201ENSMUST00000210886 487 ntBASIC6.18□□□□□ -1.42
RaraP11416 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC6.18□□□□□ -1.42
RaraP11416 AC132384.3-201ENSMUST00000219709 472 ntBASIC6.18□□□□□ -1.42
RaraP11416 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC6.18□□□□□ -1.42
RaraP11416 AC131745.1-201ENSMUST00000223660 330 ntBASIC6.18□□□□□ -1.42
RaraP11416 AC167192.2-201ENSMUST00000224794 198 ntBASIC6.18□□□□□ -1.42
RaraP11416 n-R5s88-201ENSMUST00000083173 118 ntBASIC6.18□□□□□ -1.42
RaraP11416 Gm24454-201ENSMUST00000083349 132 ntBASIC6.18□□□□□ -1.42
RaraP11416 Gm23503-201ENSMUST00000083903 107 ntBASIC6.18□□□□□ -1.42
RaraP11416 Gm22351-201ENSMUST00000083925 107 ntBASIC6.18□□□□□ -1.42
RaraP11416 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RaraP11416 Gm22365-201ENSMUST00000093750 117 ntBASIC6.18□□□□□ -1.42
RaraP11416 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
RaraP11416 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC6.18□□□□□ -1.42
RaraP11416 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RaraP11416 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
RaraP11416 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RaraP11416 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC6.18□□□□□ -1.42
RaraP11416 AC122355.1-201ENSMUST00000228155 4184 ntBASIC6.17□□□□□ -1.42
RaraP11416 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
RaraP11416 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RaraP11416 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
RaraP11416 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
RaraP11416 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RaraP11416 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RaraP11416 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC6.17□□□□□ -1.42
RaraP11416 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RaraP11416 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
RaraP11416 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
RaraP11416 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
RaraP11416 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RaraP11416 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC6.17□□□□□ -1.42
RaraP11416 Gm13311-201ENSMUST00000117863 379 ntBASIC6.17□□□□□ -1.42
RaraP11416 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC6.17□□□□□ -1.42
RaraP11416 Gm7429-201ENSMUST00000118664 348 ntBASIC6.17□□□□□ -1.42
RaraP11416 Gm15387-201ENSMUST00000120421 648 ntBASIC6.17□□□□□ -1.42
RaraP11416 Gm6446-201ENSMUST00000120604 818 ntBASIC6.17□□□□□ -1.42
RaraP11416 Gm13578-201ENSMUST00000120849 590 ntBASIC6.17□□□□□ -1.42
RaraP11416 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC6.17□□□□□ -1.42
RaraP11416 Gm12732-201ENSMUST00000121688 180 ntBASIC6.17□□□□□ -1.42
RaraP11416 Gm12293-201ENSMUST00000121898 590 ntBASIC6.17□□□□□ -1.42
RaraP11416 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC6.17□□□□□ -1.42
RaraP11416 Gm11197-201ENSMUST00000145158 839 ntBASIC6.17□□□□□ -1.42
RaraP11416 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RaraP11416 Gm24192-201ENSMUST00000157978 145 ntBASIC6.17□□□□□ -1.42
RaraP11416 Gm6264-202ENSMUST00000162896 1217 ntBASIC6.17□□□□□ -1.42
RaraP11416 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
RaraP11416 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC6.17□□□□□ -1.42
RaraP11416 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC6.17□□□□□ -1.42
RaraP11416 Gm7094-201ENSMUST00000178379 366 ntBASIC6.17□□□□□ -1.42
RaraP11416 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC6.17□□□□□ -1.42
RaraP11416 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC6.17□□□□□ -1.42
RaraP11416 Gm5842-201ENSMUST00000195073 622 ntBASIC6.17□□□□□ -1.42
RaraP11416 Gm44134-202ENSMUST00000204777 545 ntBASIC6.17□□□□□ -1.42
RaraP11416 Gm7802-201ENSMUST00000216464 262 ntBASIC6.17□□□□□ -1.42
RaraP11416 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC6.17□□□□□ -1.42
RaraP11416 Gm18247-201ENSMUST00000222937 601 ntBASIC6.17□□□□□ -1.42
RaraP11416 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RaraP11416 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RaraP11416 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
RaraP11416 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
RaraP11416 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
RaraP11416 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
RaraP11416 Gm25141-201ENSMUST00000083177 107 ntBASIC6.17□□□□□ -1.42
RaraP11416 Gm23502-201ENSMUST00000083902 145 ntBASIC6.17□□□□□ -1.42
RaraP11416 Gm5518-201ENSMUST00000084171 648 ntBASIC6.17□□□□□ -1.42
RaraP11416 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RaraP11416 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RaraP11416 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
RaraP11416 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
RaraP11416 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
RaraP11416 Gm43363-201ENSMUST00000201590 2647 ntBASIC6.17□□□□□ -1.42
RaraP11416 AC160115.1-201ENSMUST00000224678 1574 ntBASIC6.17□□□□□ -1.42
RaraP11416 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RaraP11416 AW046200-203ENSMUST00000211787 2479 ntBASIC6.17□□□□□ -1.42
RaraP11416 AC134596.1-201ENSMUST00000222016 1922 ntBASIC6.17□□□□□ -1.42
RaraP11416 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RaraP11416 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC6.17□□□□□ -1.42
RaraP11416 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
RaraP11416 Gm37049-201ENSMUST00000194356 1983 ntBASIC6.17□□□□□ -1.42
RaraP11416 Gm11885-201ENSMUST00000118473 1428 ntBASIC6.16□□□□□ -1.42
RaraP11416 AC162908.1-201ENSMUST00000219164 4563 ntBASIC6.16□□□□□ -1.42
RaraP11416 Gm43924-201ENSMUST00000204851 1736 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms