Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Col1a1P11087 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Col1a1P11087 Gm19637-201ENSMUST00000185933 579 ntBASIC4.76□□□□□ -1.65
Col1a1P11087 Gm21803-201ENSMUST00000188897 693 ntBASIC4.76□□□□□ -1.65
Col1a1P11087 Gm37741-201ENSMUST00000191768 1256 ntBASIC4.76□□□□□ -1.65
Col1a1P11087 Gm37343-201ENSMUST00000192542 111 ntBASIC4.76□□□□□ -1.65
Col1a1P11087 Gm43730-201ENSMUST00000199863 372 ntBASIC4.76□□□□□ -1.65
Col1a1P11087 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC4.76□□□□□ -1.65
Col1a1P11087 Gm6171-201ENSMUST00000220760 645 ntBASIC4.76□□□□□ -1.65
Col1a1P11087 AC125379.1-201ENSMUST00000221928 111 ntBASIC4.76□□□□□ -1.65
Col1a1P11087 AC091783.5-201ENSMUST00000224928 671 ntBASIC4.76□□□□□ -1.65
Col1a1P11087 Gm24147-201ENSMUST00000082763 144 ntBASIC4.76□□□□□ -1.65
Col1a1P11087 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Col1a1P11087 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col1a1P11087 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Col1a1P11087 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
Col1a1P11087 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col1a1P11087 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Col1a1P11087 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Col1a1P11087 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.76□□□□□ -1.65
Col1a1P11087 Gm38207-201ENSMUST00000193009 3505 ntBASIC4.76□□□□□ -1.65
Col1a1P11087 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col1a1P11087 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col1a1P11087 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Col1a1P11087 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC4.76□□□□□ -1.65
Col1a1P11087 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
Col1a1P11087 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Col1a1P11087 Gm11718-201ENSMUST00000119942 537 ntBASIC4.75□□□□□ -1.65
Col1a1P11087 Gm23667-201ENSMUST00000157466 120 ntBASIC4.75□□□□□ -1.65
Col1a1P11087 Gm23964-201ENSMUST00000157966 107 ntBASIC4.75□□□□□ -1.65
Col1a1P11087 Gm22531-201ENSMUST00000158819 140 ntBASIC4.75□□□□□ -1.65
Col1a1P11087 Gm26746-201ENSMUST00000181722 487 ntBASIC4.75□□□□□ -1.65
Col1a1P11087 Gm27392-201ENSMUST00000185041 101 ntBASIC4.75□□□□□ -1.65
Col1a1P11087 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC4.75□□□□□ -1.65
Col1a1P11087 Gm45379-201ENSMUST00000211772 549 ntBASIC4.75□□□□□ -1.65
Col1a1P11087 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Col1a1P11087 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC4.75□□□□□ -1.65
Col1a1P11087 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col1a1P11087 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col1a1P11087 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Col1a1P11087 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.75□□□□□ -1.65
Col1a1P11087 AC153969.1-201ENSMUST00000214047 2605 ntBASIC4.75□□□□□ -1.65
Col1a1P11087 AC137842.3-201ENSMUST00000228855 2397 ntBASIC4.75□□□□□ -1.65
Col1a1P11087 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Col1a1P11087 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC4.75□□□□□ -1.65
Col1a1P11087 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.75□□□□□ -1.65
Col1a1P11087 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Col1a1P11087 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Col1a1P11087 Gm37053-201ENSMUST00000192399 2087 ntBASIC4.75□□□□□ -1.65
Col1a1P11087 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Col1a1P11087 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC4.75□□□□□ -1.65
Col1a1P11087 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
Col1a1P11087 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Col1a1P11087 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Col1a1P11087 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC4.75□□□□□ -1.65
Col1a1P11087 Gm22380-201ENSMUST00000157479 95 ntBASIC4.75□□□□□ -1.65
Col1a1P11087 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
Col1a1P11087 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col1a1P11087 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col1a1P11087 Gm6240-201ENSMUST00000208014 473 ntBASIC4.75□□□□□ -1.65
Col1a1P11087 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC4.75□□□□□ -1.65
Col1a1P11087 CT010511.1-201ENSMUST00000224570 315 ntBASIC4.75□□□□□ -1.65
Col1a1P11087 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC4.75□□□□□ -1.65
Col1a1P11087 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Col1a1P11087 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC4.74□□□□□ -1.65
Col1a1P11087 Gm37488-201ENSMUST00000195434 3374 ntBASIC4.74□□□□□ -1.65
Col1a1P11087 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC4.74□□□□□ -1.65
Col1a1P11087 Gm14739-201ENSMUST00000120424 802 ntBASIC4.74□□□□□ -1.65
Col1a1P11087 Gm22840-201ENSMUST00000158444 136 ntBASIC4.74□□□□□ -1.65
Col1a1P11087 Gm23198-201ENSMUST00000158811 91 ntBASIC4.74□□□□□ -1.65
Col1a1P11087 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC4.74□□□□□ -1.65
Col1a1P11087 Gm37001-201ENSMUST00000193377 190 ntBASIC4.74□□□□□ -1.65
Col1a1P11087 Gm44879-201ENSMUST00000207007 503 ntBASIC4.74□□□□□ -1.65
Col1a1P11087 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.74□□□□□ -1.65
Col1a1P11087 Gm44681-201ENSMUST00000208447 842 ntBASIC4.74□□□□□ -1.65
Col1a1P11087 Gm45162-201ENSMUST00000209013 618 ntBASIC4.74□□□□□ -1.65
Col1a1P11087 Gm19219-201ENSMUST00000215863 724 ntBASIC4.74□□□□□ -1.65
Col1a1P11087 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC4.74□□□□□ -1.65
Col1a1P11087 AC124524.2-201ENSMUST00000223940 588 ntBASIC4.74□□□□□ -1.65
Col1a1P11087 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col1a1P11087 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Col1a1P11087 Gm5185-201ENSMUST00000080271 619 ntBASIC4.74□□□□□ -1.65
Col1a1P11087 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
Col1a1P11087 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Col1a1P11087 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Col1a1P11087 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Col1a1P11087 Gm9911-201ENSMUST00000211467 2802 ntBASIC4.73□□□□□ -1.65
Col1a1P11087 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Col1a1P11087 Gm37802-201ENSMUST00000194998 2643 ntBASIC4.73□□□□□ -1.65
Col1a1P11087 Gm18954-201ENSMUST00000222200 1792 ntBASIC4.73□□□□□ -1.65
Col1a1P11087 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Col1a1P11087 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Col1a1P11087 Gm24318-201ENSMUST00000104490 131 ntBASIC4.73□□□□□ -1.65
Col1a1P11087 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC4.73□□□□□ -1.65
Col1a1P11087 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC4.73□□□□□ -1.65
Col1a1P11087 Gm16026-202ENSMUST00000159695 772 ntBASIC4.73□□□□□ -1.65
Col1a1P11087 Gm27036-201ENSMUST00000182465 980 ntBASIC4.73□□□□□ -1.65
Col1a1P11087 Gm19503-201ENSMUST00000187109 241 ntBASIC4.73□□□□□ -1.65
Col1a1P11087 Gm29452-201ENSMUST00000187996 313 ntBASIC4.73□□□□□ -1.65
Col1a1P11087 Gm28860-201ENSMUST00000188103 313 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms