Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm42955-201ENSMUST00000197355 3393 ntBASIC5.15□□□□□ -1.59
Hoxd3P09027 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Hoxd3P09027 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Hoxd3P09027 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Hoxd3P09027 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Hoxd3P09027 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Hoxd3P09027 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
Hoxd3P09027 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
Hoxd3P09027 Gm37347-201ENSMUST00000193969 3071 ntBASIC5.15□□□□□ -1.59
Hoxd3P09027 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC5.15□□□□□ -1.59
Hoxd3P09027 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Hoxd3P09027 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Hoxd3P09027 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC5.14□□□□□ -1.59
Hoxd3P09027 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
Hoxd3P09027 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
Hoxd3P09027 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC5.14□□□□□ -1.59
Hoxd3P09027 Gm15425-201ENSMUST00000119013 2711 ntBASIC5.14□□□□□ -1.59
Hoxd3P09027 Gm42484-201ENSMUST00000196075 2104 ntBASIC5.14□□□□□ -1.59
Hoxd3P09027 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Hoxd3P09027 Gm21846-201ENSMUST00000179257 3073 ntBASIC5.14□□□□□ -1.59
Hoxd3P09027 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Hoxd3P09027 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Hoxd3P09027 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC5.14□□□□□ -1.59
Hoxd3P09027 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Hoxd3P09027 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Hoxd3P09027 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Hoxd3P09027 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
Hoxd3P09027 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Hoxd3P09027 Mir708-201ENSMUST00000102189 109 ntBASIC5.14□□□□□ -1.59
Hoxd3P09027 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Hoxd3P09027 Gm14628-201ENSMUST00000117508 635 ntBASIC5.14□□□□□ -1.59
Hoxd3P09027 Gm14733-201ENSMUST00000117680 133 ntBASIC5.14□□□□□ -1.59
Hoxd3P09027 Gm11504-201ENSMUST00000120211 173 ntBASIC5.14□□□□□ -1.59
Hoxd3P09027 Gm7327-201ENSMUST00000120925 652 ntBASIC5.14□□□□□ -1.59
Hoxd3P09027 Gm15986-201ENSMUST00000122153 400 ntBASIC5.14□□□□□ -1.59
Hoxd3P09027 Gm15164-201ENSMUST00000122203 271 ntBASIC5.14□□□□□ -1.59
Hoxd3P09027 Gm8648-201ENSMUST00000122457 221 ntBASIC5.14□□□□□ -1.59
Hoxd3P09027 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC5.14□□□□□ -1.59
Hoxd3P09027 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Hoxd3P09027 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC5.14□□□□□ -1.59
Hoxd3P09027 Gm23674-201ENSMUST00000157473 131 ntBASIC5.14□□□□□ -1.59
Hoxd3P09027 Gm25550-201ENSMUST00000158079 128 ntBASIC5.14□□□□□ -1.59
Hoxd3P09027 Gm26041-201ENSMUST00000158148 108 ntBASIC5.14□□□□□ -1.59
Hoxd3P09027 Mir3112-201ENSMUST00000175431 82 ntBASIC5.14□□□□□ -1.59
Hoxd3P09027 Gm23966-201ENSMUST00000179823 107 ntBASIC5.14□□□□□ -1.59
Hoxd3P09027 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Hoxd3P09027 Gm37503-201ENSMUST00000192088 319 ntBASIC5.14□□□□□ -1.59
Hoxd3P09027 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC5.14□□□□□ -1.59
Hoxd3P09027 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC5.14□□□□□ -1.59
Hoxd3P09027 Gm44859-201ENSMUST00000207831 94 ntBASIC5.14□□□□□ -1.59
Hoxd3P09027 Gm18620-201ENSMUST00000222295 324 ntBASIC5.14□□□□□ -1.59
Hoxd3P09027 AC147633.1-201ENSMUST00000225134 259 ntBASIC5.14□□□□□ -1.59
Hoxd3P09027 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Hoxd3P09027 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC5.14□□□□□ -1.59
Hoxd3P09027 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC5.14□□□□□ -1.59
Hoxd3P09027 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Hoxd3P09027 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Hoxd3P09027 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Hoxd3P09027 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Hoxd3P09027 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
Hoxd3P09027 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC5.14□□□□□ -1.59
Hoxd3P09027 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Hoxd3P09027 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
Hoxd3P09027 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC5.14□□□□□ -1.59
Hoxd3P09027 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC5.14□□□□□ -1.59
Hoxd3P09027 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Hoxd3P09027 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
Hoxd3P09027 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
Hoxd3P09027 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Hoxd3P09027 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Hoxd3P09027 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Hoxd3P09027 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Hoxd3P09027 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Hoxd3P09027 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Hoxd3P09027 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC5.14□□□□□ -1.59
Hoxd3P09027 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Hoxd3P09027 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Hoxd3P09027 Gm44661-201ENSMUST00000208830 3503 ntBASIC5.14□□□□□ -1.59
Hoxd3P09027 AC129085.2-201ENSMUST00000223763 2800 ntBASIC5.14□□□□□ -1.59
Hoxd3P09027 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Hoxd3P09027 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Hoxd3P09027 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC5.13□□□□□ -1.59
Hoxd3P09027 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Hoxd3P09027 AC134577.3-201ENSMUST00000226490 3000 ntBASIC5.13□□□□□ -1.59
Hoxd3P09027 Gm7988-201ENSMUST00000196623 2297 ntBASIC5.13□□□□□ -1.59
Hoxd3P09027 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC5.13□□□□□ -1.59
Hoxd3P09027 AC022775.1-201ENSMUST00000228163 2698 ntBASIC5.13□□□□□ -1.59
Hoxd3P09027 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Hoxd3P09027 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Hoxd3P09027 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Hoxd3P09027 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Hoxd3P09027 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Hoxd3P09027 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
Hoxd3P09027 AC131687.1-201ENSMUST00000225931 5446 ntBASIC5.13□□□□□ -1.59
Hoxd3P09027 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Hoxd3P09027 Gm14823-201ENSMUST00000117698 238 ntBASIC5.13□□□□□ -1.59
Hoxd3P09027 Gm13265-201ENSMUST00000118090 421 ntBASIC5.13□□□□□ -1.59
Hoxd3P09027 Gm14570-201ENSMUST00000119444 391 ntBASIC5.13□□□□□ -1.59
Hoxd3P09027 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC5.13□□□□□ -1.59
Hoxd3P09027 Gm13511-201ENSMUST00000121167 363 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms