Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gm26828-201ENSMUST00000180640 172 ntBASIC4.42□□□□□ -1.7
Hcn1O88704 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC4.42□□□□□ -1.7
Hcn1O88704 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Hcn1O88704 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC4.42□□□□□ -1.7
Hcn1O88704 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC4.42□□□□□ -1.7
Hcn1O88704 Gm38279-201ENSMUST00000194067 1131 ntBASIC4.42□□□□□ -1.7
Hcn1O88704 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC4.42□□□□□ -1.7
Hcn1O88704 Gm43237-201ENSMUST00000196835 1044 ntBASIC4.42□□□□□ -1.7
Hcn1O88704 Gm3148-201ENSMUST00000203594 612 ntBASIC4.42□□□□□ -1.7
Hcn1O88704 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Hcn1O88704 Gm20997-201ENSMUST00000205148 231 ntBASIC4.42□□□□□ -1.7
Hcn1O88704 Gm20948-201ENSMUST00000211091 449 ntBASIC4.42□□□□□ -1.7
Hcn1O88704 Gm7128-201ENSMUST00000211639 533 ntBASIC4.42□□□□□ -1.7
Hcn1O88704 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC4.42□□□□□ -1.7
Hcn1O88704 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Hcn1O88704 Gm18338-201ENSMUST00000222381 560 ntBASIC4.42□□□□□ -1.7
Hcn1O88704 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC4.42□□□□□ -1.7
Hcn1O88704 AC140210.1-201ENSMUST00000224961 534 ntBASIC4.42□□□□□ -1.7
Hcn1O88704 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC4.42□□□□□ -1.7
Hcn1O88704 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Hcn1O88704 Gm6065-201ENSMUST00000081336 492 ntBASIC4.42□□□□□ -1.7
Hcn1O88704 Gm22043-201ENSMUST00000082993 158 ntBASIC4.42□□□□□ -1.7
Hcn1O88704 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Hcn1O88704 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Hcn1O88704 AC154552.6-201ENSMUST00000221365 1342 ntBASIC4.42□□□□□ -1.7
Hcn1O88704 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Hcn1O88704 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Hcn1O88704 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Hcn1O88704 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Hcn1O88704 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Hcn1O88704 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Hcn1O88704 Gm24124-201ENSMUST00000104103 132 ntBASIC4.41□□□□□ -1.7
Hcn1O88704 Gm15779-201ENSMUST00000117470 412 ntBASIC4.41□□□□□ -1.7
Hcn1O88704 Gm14706-201ENSMUST00000117744 255 ntBASIC4.41□□□□□ -1.7
Hcn1O88704 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.41□□□□□ -1.7
Hcn1O88704 Gm12788-201ENSMUST00000119090 308 ntBASIC4.41□□□□□ -1.7
Hcn1O88704 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC4.41□□□□□ -1.7
Hcn1O88704 Gm16053-201ENSMUST00000120511 188 ntBASIC4.41□□□□□ -1.7
Hcn1O88704 Gm12327-201ENSMUST00000121729 1168 ntBASIC4.41□□□□□ -1.7
Hcn1O88704 Defa-ps12-201ENSMUST00000122353 193 ntBASIC4.41□□□□□ -1.7
Hcn1O88704 Gm23792-201ENSMUST00000122557 93 ntBASIC4.41□□□□□ -1.7
Hcn1O88704 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Hcn1O88704 Gm24444-201ENSMUST00000157244 308 ntBASIC4.41□□□□□ -1.7
Hcn1O88704 Gm22940-201ENSMUST00000158560 155 ntBASIC4.41□□□□□ -1.7
Hcn1O88704 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Hcn1O88704 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Hcn1O88704 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Hcn1O88704 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Hcn1O88704 S100a11-ps-201ENSMUST00000181735 306 ntBASIC4.41□□□□□ -1.7
Hcn1O88704 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Hcn1O88704 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC4.41□□□□□ -1.7
Hcn1O88704 Gm8939-201ENSMUST00000192577 964 ntBASIC4.41□□□□□ -1.7
Hcn1O88704 Gm43005-201ENSMUST00000199015 648 ntBASIC4.41□□□□□ -1.7
Hcn1O88704 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC4.41□□□□□ -1.7
Hcn1O88704 Gm43368-201ENSMUST00000200638 409 ntBASIC4.41□□□□□ -1.7
Hcn1O88704 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC4.41□□□□□ -1.7
Hcn1O88704 Gm18306-201ENSMUST00000207338 569 ntBASIC4.41□□□□□ -1.7
Hcn1O88704 Olfr1309-201ENSMUST00000207885 964 ntBASIC4.41□□□□□ -1.7
Hcn1O88704 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC4.41□□□□□ -1.7
Hcn1O88704 Gm17917-201ENSMUST00000218561 953 ntBASIC4.41□□□□□ -1.7
Hcn1O88704 AC121986.1-201ENSMUST00000218588 781 ntBASIC4.41□□□□□ -1.7
Hcn1O88704 Olfr790-204ENSMUST00000218901 1070 ntBASIC4.41□□□□□ -1.7
Hcn1O88704 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Hcn1O88704 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC4.41□□□□□ -1.7
Hcn1O88704 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC4.41□□□□□ -1.7
Hcn1O88704 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Hcn1O88704 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC4.41□□□□□ -1.7
Hcn1O88704 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Hcn1O88704 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Hcn1O88704 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Hcn1O88704 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Hcn1O88704 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.41□□□□□ -1.7
Hcn1O88704 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC4.41□□□□□ -1.7
Hcn1O88704 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC4.41□□□□□ -1.7
Hcn1O88704 AC102847.2-201ENSMUST00000227799 2906 ntBASIC4.41□□□□□ -1.7
Hcn1O88704 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Hcn1O88704 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Hcn1O88704 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Hcn1O88704 Gm37099-201ENSMUST00000191902 3451 ntBASIC4.4□□□□□ -1.7
Hcn1O88704 AC108802.1-201ENSMUST00000219501 3142 ntBASIC4.4□□□□□ -1.7
Hcn1O88704 AC162938.2-205ENSMUST00000217551 2828 ntBASIC4.4□□□□□ -1.7
Hcn1O88704 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Hcn1O88704 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
Hcn1O88704 Gm14750-201ENSMUST00000118262 516 ntBASIC4.4□□□□□ -1.71
Hcn1O88704 Gm12090-201ENSMUST00000118692 758 ntBASIC4.4□□□□□ -1.71
Hcn1O88704 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Hcn1O88704 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC4.4□□□□□ -1.71
Hcn1O88704 Gm26098-201ENSMUST00000157247 288 ntBASIC4.4□□□□□ -1.71
Hcn1O88704 Gm25655-201ENSMUST00000158465 290 ntBASIC4.4□□□□□ -1.71
Hcn1O88704 Gm5258-201ENSMUST00000165437 327 ntBASIC4.4□□□□□ -1.71
Hcn1O88704 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Hcn1O88704 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC4.4□□□□□ -1.71
Hcn1O88704 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC4.4□□□□□ -1.71
Hcn1O88704 Gm25534-201ENSMUST00000175365 125 ntBASIC4.4□□□□□ -1.71
Hcn1O88704 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC4.4□□□□□ -1.71
Hcn1O88704 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC4.4□□□□□ -1.71
Hcn1O88704 Gm26950-201ENSMUST00000182734 498 ntBASIC4.4□□□□□ -1.71
Hcn1O88704 Gm28118-201ENSMUST00000185957 294 ntBASIC4.4□□□□□ -1.71
Hcn1O88704 Gm28974-201ENSMUST00000187893 231 ntBASIC4.4□□□□□ -1.71
Hcn1O88704 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC4.4□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 112.1 ms