Protein–RNA interactions for Protein: O70258

Sgce, Epsilon-sarcoglycan, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgceO70258 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SgceO70258 Gm9427-201ENSMUST00000116187 651 ntBASIC3.82□□□□□ -1.8
SgceO70258 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC3.82□□□□□ -1.8
SgceO70258 Gm11878-201ENSMUST00000117908 400 ntBASIC3.82□□□□□ -1.8
SgceO70258 Gm3757-201ENSMUST00000125878 675 ntBASIC3.82□□□□□ -1.8
SgceO70258 Gm25655-201ENSMUST00000158465 290 ntBASIC3.82□□□□□ -1.8
SgceO70258 Gm15796-201ENSMUST00000162135 204 ntBASIC3.82□□□□□ -1.8
SgceO70258 Mir3090-201ENSMUST00000175597 87 ntBASIC3.82□□□□□ -1.8
SgceO70258 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SgceO70258 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC3.82□□□□□ -1.8
SgceO70258 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SgceO70258 Gm27690-201ENSMUST00000184596 126 ntBASIC3.82□□□□□ -1.8
SgceO70258 Gm28471-201ENSMUST00000185994 615 ntBASIC3.82□□□□□ -1.8
SgceO70258 Gm28598-201ENSMUST00000186490 615 ntBASIC3.82□□□□□ -1.8
SgceO70258 Gm29268-201ENSMUST00000188669 615 ntBASIC3.82□□□□□ -1.8
SgceO70258 Gm29218-205ENSMUST00000190846 615 ntBASIC3.82□□□□□ -1.8
SgceO70258 Gm28978-201ENSMUST00000191120 615 ntBASIC3.82□□□□□ -1.8
SgceO70258 Gm37172-201ENSMUST00000191926 615 ntBASIC3.82□□□□□ -1.8
SgceO70258 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC3.82□□□□□ -1.8
SgceO70258 Gm42566-201ENSMUST00000197120 643 ntBASIC3.82□□□□□ -1.8
SgceO70258 Gm18452-201ENSMUST00000202968 1111 ntBASIC3.82□□□□□ -1.8
SgceO70258 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC3.82□□□□□ -1.8
SgceO70258 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC3.82□□□□□ -1.8
SgceO70258 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SgceO70258 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SgceO70258 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SgceO70258 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SgceO70258 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SgceO70258 n-R5s182-201ENSMUST00000083889 107 ntBASIC3.82□□□□□ -1.8
SgceO70258 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SgceO70258 Gm43527-201ENSMUST00000198749 3178 ntBASIC3.82□□□□□ -1.8
SgceO70258 AC140397.1-201ENSMUST00000225563 4562 ntBASIC3.82□□□□□ -1.8
SgceO70258 Gm28240-201ENSMUST00000187560 2053 ntBASIC3.82□□□□□ -1.8
SgceO70258 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SgceO70258 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.81□□□□□ -1.8
SgceO70258 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SgceO70258 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SgceO70258 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SgceO70258 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
SgceO70258 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SgceO70258 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.81□□□□□ -1.8
SgceO70258 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
SgceO70258 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SgceO70258 Gm12067-201ENSMUST00000119755 1148 ntBASIC3.81□□□□□ -1.8
SgceO70258 Gm11398-201ENSMUST00000120330 320 ntBASIC3.81□□□□□ -1.8
SgceO70258 Gm4487-201ENSMUST00000150617 442 ntBASIC3.81□□□□□ -1.8
SgceO70258 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SgceO70258 Gm26171-201ENSMUST00000158422 131 ntBASIC3.81□□□□□ -1.8
SgceO70258 Gm3091-201ENSMUST00000163408 484 ntBASIC3.81□□□□□ -1.8
SgceO70258 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC3.81□□□□□ -1.8
SgceO70258 Gm21241-201ENSMUST00000179551 934 ntBASIC3.81□□□□□ -1.8
SgceO70258 Gm8604-201ENSMUST00000183150 965 ntBASIC3.81□□□□□ -1.8
SgceO70258 Gm4842-201ENSMUST00000183237 835 ntBASIC3.81□□□□□ -1.8
SgceO70258 Gm27805-201ENSMUST00000184513 79 ntBASIC3.81□□□□□ -1.8
SgceO70258 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SgceO70258 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SgceO70258 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SgceO70258 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SgceO70258 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SgceO70258 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SgceO70258 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SgceO70258 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SgceO70258 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SgceO70258 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SgceO70258 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SgceO70258 Gm20819-201ENSMUST00000191091 925 ntBASIC3.81□□□□□ -1.8
SgceO70258 Gm20871-201ENSMUST00000191322 931 ntBASIC3.81□□□□□ -1.8
SgceO70258 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SgceO70258 Gm19214-201ENSMUST00000191956 1083 ntBASIC3.81□□□□□ -1.8
SgceO70258 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SgceO70258 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SgceO70258 Gm37167-201ENSMUST00000194946 396 ntBASIC3.81□□□□□ -1.8
SgceO70258 Gm42991-201ENSMUST00000196468 3837 ntBASIC3.81□□□□□ -1.8
SgceO70258 Gm43710-201ENSMUST00000199583 452 ntBASIC3.81□□□□□ -1.8
SgceO70258 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC3.81□□□□□ -1.8
SgceO70258 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SgceO70258 Gm45081-201ENSMUST00000206281 572 ntBASIC3.81□□□□□ -1.8
SgceO70258 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC3.81□□□□□ -1.8
SgceO70258 AC153526.4-201ENSMUST00000217713 379 ntBASIC3.81□□□□□ -1.8
SgceO70258 AC102542.1-201ENSMUST00000225204 1138 ntBASIC3.81□□□□□ -1.8
SgceO70258 AC154592.1-201ENSMUST00000225784 574 ntBASIC3.81□□□□□ -1.8
SgceO70258 AC126690.1-201ENSMUST00000228898 397 ntBASIC3.81□□□□□ -1.8
SgceO70258 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SgceO70258 Mir134-201ENSMUST00000083492 71 ntBASIC3.81□□□□□ -1.8
SgceO70258 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SgceO70258 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
SgceO70258 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
SgceO70258 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SgceO70258 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SgceO70258 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SgceO70258 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
SgceO70258 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SgceO70258 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SgceO70258 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SgceO70258 AC174797.3-203ENSMUST00000225749 2078 ntBASIC3.8□□□□□ -1.8
SgceO70258 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SgceO70258 Gm43059-201ENSMUST00000202437 1388 ntBASIC3.8□□□□□ -1.8
SgceO70258 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SgceO70258 Gm23063-201ENSMUST00000102350 93 ntBASIC3.8□□□□□ -1.8
SgceO70258 Gm15933-201ENSMUST00000117215 616 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms