Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 Gm15171-201ENSMUST00000122191 334 ntBASIC4.04□□□□□ -1.76
ClockO08785 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ClockO08785 Gm23585-201ENSMUST00000157656 102 ntBASIC4.04□□□□□ -1.76
ClockO08785 Gm17043-201ENSMUST00000164621 1283 ntBASIC4.04□□□□□ -1.76
ClockO08785 Gm18560-201ENSMUST00000173463 1123 ntBASIC4.04□□□□□ -1.76
ClockO08785 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC4.04□□□□□ -1.76
ClockO08785 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC4.04□□□□□ -1.76
ClockO08785 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC4.04□□□□□ -1.76
ClockO08785 Gm29320-201ENSMUST00000185235 615 ntBASIC4.04□□□□□ -1.76
ClockO08785 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ClockO08785 Gm28471-201ENSMUST00000185994 615 ntBASIC4.04□□□□□ -1.76
ClockO08785 Gm29179-202ENSMUST00000186138 615 ntBASIC4.04□□□□□ -1.76
ClockO08785 Gm28598-201ENSMUST00000186490 615 ntBASIC4.04□□□□□ -1.76
ClockO08785 Gm29448-201ENSMUST00000186675 615 ntBASIC4.04□□□□□ -1.76
ClockO08785 Gm29314-201ENSMUST00000186800 615 ntBASIC4.04□□□□□ -1.76
ClockO08785 Gm28253-202ENSMUST00000187971 615 ntBASIC4.04□□□□□ -1.76
ClockO08785 Gm29268-201ENSMUST00000188669 615 ntBASIC4.04□□□□□ -1.76
ClockO08785 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC4.04□□□□□ -1.76
ClockO08785 Gm29169-201ENSMUST00000189835 615 ntBASIC4.04□□□□□ -1.76
ClockO08785 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ClockO08785 Gm29218-205ENSMUST00000190846 615 ntBASIC4.04□□□□□ -1.76
ClockO08785 Gm28978-201ENSMUST00000191120 615 ntBASIC4.04□□□□□ -1.76
ClockO08785 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC4.04□□□□□ -1.76
ClockO08785 Gm37172-201ENSMUST00000191926 615 ntBASIC4.04□□□□□ -1.76
ClockO08785 Gm36954-201ENSMUST00000195362 363 ntBASIC4.04□□□□□ -1.76
ClockO08785 Gm42999-201ENSMUST00000198049 786 ntBASIC4.04□□□□□ -1.76
ClockO08785 Gm43309-201ENSMUST00000200837 458 ntBASIC4.04□□□□□ -1.76
ClockO08785 Gm8748-201ENSMUST00000211125 587 ntBASIC4.04□□□□□ -1.76
ClockO08785 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC4.04□□□□□ -1.76
ClockO08785 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
ClockO08785 AC132384.13-201ENSMUST00000219556 1159 ntBASIC4.04□□□□□ -1.76
ClockO08785 AC127279.1-201ENSMUST00000220140 637 ntBASIC4.04□□□□□ -1.76
ClockO08785 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC4.04□□□□□ -1.76
ClockO08785 AC131745.2-201ENSMUST00000225736 565 ntBASIC4.04□□□□□ -1.76
ClockO08785 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ClockO08785 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
ClockO08785 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ClockO08785 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
ClockO08785 Gm22220-201ENSMUST00000082671 149 ntBASIC4.04□□□□□ -1.76
ClockO08785 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
ClockO08785 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
ClockO08785 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
ClockO08785 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
ClockO08785 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC4.04□□□□□ -1.76
ClockO08785 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.03□□□□□ -1.76
ClockO08785 Gm12586-201ENSMUST00000117328 1316 ntBASIC4.03□□□□□ -1.76
ClockO08785 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
ClockO08785 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
ClockO08785 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.03□□□□□ -1.76
ClockO08785 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.03□□□□□ -1.76
ClockO08785 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
ClockO08785 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
ClockO08785 Gm5060-201ENSMUST00000120072 599 ntBASIC4.03□□□□□ -1.76
ClockO08785 Gm13430-201ENSMUST00000121366 288 ntBASIC4.03□□□□□ -1.76
ClockO08785 Gm22870-201ENSMUST00000157501 112 ntBASIC4.03□□□□□ -1.76
ClockO08785 Gm23385-201ENSMUST00000158592 295 ntBASIC4.03□□□□□ -1.76
ClockO08785 Gm16303-201ENSMUST00000161498 390 ntBASIC4.03□□□□□ -1.76
ClockO08785 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
ClockO08785 Gm21756-201ENSMUST00000178380 930 ntBASIC4.03□□□□□ -1.76
ClockO08785 Gm21405-201ENSMUST00000179024 930 ntBASIC4.03□□□□□ -1.76
ClockO08785 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ClockO08785 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
ClockO08785 Gm21191-201ENSMUST00000186484 930 ntBASIC4.03□□□□□ -1.76
ClockO08785 Gm29332-201ENSMUST00000190829 227 ntBASIC4.03□□□□□ -1.76
ClockO08785 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ClockO08785 Gm29503-201ENSMUST00000191044 930 ntBASIC4.03□□□□□ -1.76
ClockO08785 Gm37961-201ENSMUST00000192729 299 ntBASIC4.03□□□□□ -1.76
ClockO08785 Gm37111-201ENSMUST00000193250 634 ntBASIC4.03□□□□□ -1.76
ClockO08785 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC4.03□□□□□ -1.76
ClockO08785 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC4.03□□□□□ -1.76
ClockO08785 Gm44972-201ENSMUST00000206419 406 ntBASIC4.03□□□□□ -1.76
ClockO08785 Gm18877-201ENSMUST00000207706 539 ntBASIC4.03□□□□□ -1.76
ClockO08785 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
ClockO08785 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC4.03□□□□□ -1.76
ClockO08785 Gm7093-201ENSMUST00000223004 581 ntBASIC4.03□□□□□ -1.76
ClockO08785 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.03□□□□□ -1.76
ClockO08785 AC154738.2-201ENSMUST00000227403 1110 ntBASIC4.03□□□□□ -1.76
ClockO08785 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC4.03□□□□□ -1.76
ClockO08785 Gm6776-201ENSMUST00000057752 900 ntBASIC4.03□□□□□ -1.76
ClockO08785 Gm24319-201ENSMUST00000083389 107 ntBASIC4.03□□□□□ -1.76
ClockO08785 Mir17-201ENSMUST00000083574 84 ntBASIC4.03□□□□□ -1.76
ClockO08785 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
ClockO08785 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
ClockO08785 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
ClockO08785 Gm37527-201ENSMUST00000192406 3547 ntBASIC4.03□□□□□ -1.76
ClockO08785 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
ClockO08785 Gm37211-201ENSMUST00000193392 3433 ntBASIC4.03□□□□□ -1.76
ClockO08785 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ClockO08785 Synpr-207ENSMUST00000223583 3362 ntBASIC4.03□□□□□ -1.76
ClockO08785 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
ClockO08785 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
ClockO08785 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ClockO08785 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
ClockO08785 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ClockO08785 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
ClockO08785 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
ClockO08785 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ClockO08785 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
ClockO08785 Gm24578-201ENSMUST00000103970 129 ntBASIC4.02□□□□□ -1.77
ClockO08785 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms