Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Gm22101-201ENSMUST00000157928 103 ntBASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Gm24186-201ENSMUST00000157983 127 ntBASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Gm23115-201ENSMUST00000158480 108 ntBASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Gm6872-201ENSMUST00000165001 700 ntBASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Gm10087-201ENSMUST00000167650 330 ntBASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Gm29519-201ENSMUST00000186994 398 ntBASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Gm8419-201ENSMUST00000189886 412 ntBASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Gm29524-201ENSMUST00000190819 699 ntBASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Gm43516-201ENSMUST00000196891 322 ntBASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Gm43494-201ENSMUST00000197672 388 ntBASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Igkv4-73-201ENSMUST00000199760 358 ntBASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Gm6719-201ENSMUST00000202067 335 ntBASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Gm44149-201ENSMUST00000204256 226 ntBASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Gm44923-201ENSMUST00000206673 85 ntBASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Gm45742-201ENSMUST00000212400 433 ntBASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 AC139758.1-201ENSMUST00000226573 930 ntBASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 AC166105.1-201ENSMUST00000227512 482 ntBASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 n-R5s94-201ENSMUST00000082573 119 ntBASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
Pcdh1F7BJK1 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
Pcdh1F7BJK1 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC5.09□□□□□ -1.6
Pcdh1F7BJK1 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC5.09□□□□□ -1.6
Pcdh1F7BJK1 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
Pcdh1F7BJK1 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Pcdh1F7BJK1 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Pcdh1F7BJK1 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Gm42661-201ENSMUST00000202364 1442 ntBASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Gm42561-201ENSMUST00000202563 1442 ntBASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 n-R5s178-201ENSMUST00000104249 114 ntBASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Gm13379-201ENSMUST00000118053 621 ntBASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Gm12935-201ENSMUST00000119352 246 ntBASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Gm15014-201ENSMUST00000120742 258 ntBASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Gm7931-201ENSMUST00000121537 271 ntBASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Gm15335-201ENSMUST00000122442 411 ntBASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Gm7855-201ENSMUST00000137737 687 ntBASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Gm26106-201ENSMUST00000157254 228 ntBASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Gm22668-201ENSMUST00000158716 260 ntBASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Gm22326-201ENSMUST00000158897 351 ntBASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Gm4134-201ENSMUST00000173244 563 ntBASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Mir7046-201ENSMUST00000183435 66 ntBASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Gm28016-201ENSMUST00000184594 196 ntBASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Gm37191-201ENSMUST00000193346 388 ntBASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Ear14-201ENSMUST00000049559 468 ntBASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Gm9845-201ENSMUST00000056409 598 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 102.2 ms