Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
Scn3aA2ASI5 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Scn3aA2ASI5 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
Scn3aA2ASI5 Gm43526-201ENSMUST00000196666 1565 ntBASIC4.5□□□□□ -1.69
Scn3aA2ASI5 Gm37655-201ENSMUST00000193968 4123 ntBASIC4.5□□□□□ -1.69
Scn3aA2ASI5 Gm13961-201ENSMUST00000119282 4772 ntBASIC4.5□□□□□ -1.69
Scn3aA2ASI5 Gm11393-201ENSMUST00000118019 288 ntBASIC4.5□□□□□ -1.69
Scn3aA2ASI5 Gm15026-201ENSMUST00000119219 458 ntBASIC4.5□□□□□ -1.69
Scn3aA2ASI5 Gm11645-201ENSMUST00000121589 649 ntBASIC4.5□□□□□ -1.69
Scn3aA2ASI5 Gm11403-201ENSMUST00000122195 369 ntBASIC4.5□□□□□ -1.69
Scn3aA2ASI5 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC4.5□□□□□ -1.69
Scn3aA2ASI5 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC4.5□□□□□ -1.69
Scn3aA2ASI5 Gm23365-201ENSMUST00000175019 125 ntBASIC4.5□□□□□ -1.69
Scn3aA2ASI5 Gm25960-201ENSMUST00000175110 125 ntBASIC4.5□□□□□ -1.69
Scn3aA2ASI5 Gm44453-201ENSMUST00000175161 126 ntBASIC4.5□□□□□ -1.69
Scn3aA2ASI5 Gm25195-201ENSMUST00000177656 126 ntBASIC4.5□□□□□ -1.69
Scn3aA2ASI5 Gm10067-201ENSMUST00000179462 348 ntBASIC4.5□□□□□ -1.69
Scn3aA2ASI5 Gm37241-201ENSMUST00000191736 523 ntBASIC4.5□□□□□ -1.69
Scn3aA2ASI5 Gm42983-201ENSMUST00000199879 815 ntBASIC4.5□□□□□ -1.69
Scn3aA2ASI5 Gm43084-201ENSMUST00000200696 947 ntBASIC4.5□□□□□ -1.69
Scn3aA2ASI5 Gm44871-201ENSMUST00000207821 497 ntBASIC4.5□□□□□ -1.69
Scn3aA2ASI5 Gm45574-201ENSMUST00000210921 331 ntBASIC4.5□□□□□ -1.69
Scn3aA2ASI5 AC153516.1-201ENSMUST00000217955 779 ntBASIC4.5□□□□□ -1.69
Scn3aA2ASI5 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC4.5□□□□□ -1.69
Scn3aA2ASI5 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Scn3aA2ASI5 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Scn3aA2ASI5 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Scn3aA2ASI5 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Scn3aA2ASI5 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC4.5□□□□□ -1.69
Scn3aA2ASI5 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Scn3aA2ASI5 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Scn3aA2ASI5 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC4.49□□□□□ -1.69
Scn3aA2ASI5 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.49□□□□□ -1.69
Scn3aA2ASI5 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Scn3aA2ASI5 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Scn3aA2ASI5 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC4.49□□□□□ -1.69
Scn3aA2ASI5 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
Scn3aA2ASI5 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC4.49□□□□□ -1.69
Scn3aA2ASI5 Gm25420-201ENSMUST00000104216 127 ntBASIC4.49□□□□□ -1.69
Scn3aA2ASI5 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Scn3aA2ASI5 Gm11971-201ENSMUST00000117715 288 ntBASIC4.49□□□□□ -1.69
Scn3aA2ASI5 Gm12564-201ENSMUST00000119860 321 ntBASIC4.49□□□□□ -1.69
Scn3aA2ASI5 Gm11982-201ENSMUST00000121480 314 ntBASIC4.49□□□□□ -1.69
Scn3aA2ASI5 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Scn3aA2ASI5 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC4.49□□□□□ -1.69
Scn3aA2ASI5 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Scn3aA2ASI5 Scgb2b6-201ENSMUST00000188132 330 ntBASIC4.49□□□□□ -1.69
Scn3aA2ASI5 Gm28997-201ENSMUST00000188759 429 ntBASIC4.49□□□□□ -1.69
Scn3aA2ASI5 Gm45539-201ENSMUST00000210313 428 ntBASIC4.49□□□□□ -1.69
Scn3aA2ASI5 AL672194.1-201ENSMUST00000224841 603 ntBASIC4.49□□□□□ -1.69
Scn3aA2ASI5 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Scn3aA2ASI5 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC4.49□□□□□ -1.69
Scn3aA2ASI5 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Scn3aA2ASI5 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Scn3aA2ASI5 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Scn3aA2ASI5 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Scn3aA2ASI5 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Scn3aA2ASI5 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.49□□□□□ -1.69
Scn3aA2ASI5 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Gm25058-201ENSMUST00000157365 128 ntBASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Gm6625-201ENSMUST00000177870 272 ntBASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Gm25942-201ENSMUST00000180080 110 ntBASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Gm6075-201ENSMUST00000186816 486 ntBASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Gm29563-201ENSMUST00000187249 496 ntBASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Gm42453-201ENSMUST00000200477 409 ntBASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC4.48□□□□□ -1.69
Scn3aA2ASI5 AC153852.1-201ENSMUST00000217881 567 ntBASIC4.48□□□□□ -1.69
Scn3aA2ASI5 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Gm25592-201ENSMUST00000082635 131 ntBASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Gm43341-201ENSMUST00000200104 1308 ntBASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Gm43831-201ENSMUST00000200461 2598 ntBASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Mir676-201ENSMUST00000102443 89 ntBASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Gm15263-201ENSMUST00000121556 642 ntBASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Gm22792-201ENSMUST00000157225 133 ntBASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Gm27760-201ENSMUST00000185048 114 ntBASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Gm19243-201ENSMUST00000198592 269 ntBASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Gm7786-201ENSMUST00000210494 436 ntBASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC4.48□□□□□ -1.69
Scn3aA2ASI5 CT485612.3-201ENSMUST00000222179 408 ntBASIC4.48□□□□□ -1.69
Scn3aA2ASI5 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC4.48□□□□□ -1.69
Scn3aA2ASI5 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Gm45149-201ENSMUST00000206459 2172 ntBASIC4.48□□□□□ -1.69
Scn3aA2ASI5 Gm42768-201ENSMUST00000197734 2897 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms